.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (HCC1395_tumor_vs_HCC1395_BL;manta)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/9d16685b1433810bcaac4fd958859c/.command.log
Size: 470 bytes
Task: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX (HCC1395_tumor_vs_HCC1395_BL;manta)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c1/34a221e4e154c24ef88f94c4b4e993/HCC1395_tumor_vs_HCC1395_BL.manta.somatic_sv_custom.ann_snpEff_VEP.ann.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/9d16685b1433810bcaac4fd958859c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/9d16685b1433810bcaac4fd958859c/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory