Clear
Retried
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SPLIT_MULTIALLELIC (Sig_18_Blood) 18s 2s 7s 8s 34.2 MB 312% 3.0 GB 197.1 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (Sig_18_Blood) 8s 7s 0s 0s 31.4 MB 4607% 165.2 KB 1.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_Blood) 13s 1s 1s 11s 384.2 MB 192% 132.7 MB 4.0 MB 0 bytes 4.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (Sig_18_Blood) 29s 1s 3s 24s 476.2 MB 798% 704.2 MB 434.1 KB 0 bytes 8.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (Sig_18_Blood) 51s 18s 23s 9s 490.3 MB 152% 3.2 GB 187.7 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_Blood) 5s 1s 0s 3s 10.0 MB 100% 135.5 MB 2.2 MB 0 bytes 648.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood) 25s 20s 3s 2s 213.3 MB 317% 95.8 MB 737.3 KB 0 bytes 744.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_Blood) 5s 1s 2s 1s 126.6 MB 1499% 60.5 MB 197.6 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_Blood) 15s 3s 3s 9s 9.4 MB 128% 132.4 MB 130.1 KB 0 bytes 132.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_Blood) 6s 4s - - 3.1 MB 116% 723.1 KB 108.2 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_Blood) 5s 1s 0s 3s 20.5 MB 208% 157.5 MB 12.6 MB 0 bytes 3.4 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 53s 38s 3s 11s 536.5 MB 276% 149.8 MB 1.5 MB 0 bytes 1.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (Sig_18_Blood) 14s 1s 3s 9s 911.0 MB 10150% 15.9 MB 442.3 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (Sig_18_Blood) 5s 2s 0s 2s 12.7 MB 748% 8.3 MB 18.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (Sig_18_Blood) 18s 2s 7s 8s 34.1 MB 285% 3.0 GB 216.4 KB 0 bytes 228.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (Sig_18_Blood) 3s 2s - - 21.5 MB 7884% 637.6 KB 524.6 KB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood) 5s 3s 0s 1s 3.7 MB 5458% 1.1 MB 811.8 KB 0 bytes 96.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (Sig_18_Blood) 4s 2s 0s 1s 13.8 MB 2407% 31.2 MB 340.3 KB 0 bytes 348.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (Sig_18_Blood) 7s 1s 3s 2s 1.6 GB 932% 81.4 MB 58.4 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:GT_CORRECTION (Sig_18_Blood) 7s 2s 3s 1s 1.3 GB 297% 68.6 MB 42.8 KB 0 bytes 56.0 KB 1
30 items found |
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