|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_tissue)
|
30s |
3s |
18s |
9s |
9.1 MB |
126% |
533.0 MB |
133.6 KB |
0 bytes |
136.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_tissue)
|
11s |
2s |
5s |
3s |
53.0 MB |
101% |
536.1 MB |
2.2 MB |
0 bytes |
652.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_tissue)
|
16s |
1s |
4s |
11s |
252.6 MB |
219% |
533.3 MB |
6.3 MB |
4.0 KB |
6.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_tissue)
|
4s |
1s |
- |
- |
3.3 MB |
147% |
724.2 KB |
108.2 KB |
0 bytes |
112.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_tissue)
|
8s |
1s |
4s |
2s |
173.4 MB |
183% |
558.7 MB |
13.2 MB |
0 bytes |
3.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_tissue)
|
1m 2s |
45s |
8s |
8s |
633.9 MB |
195% |
259.3 MB |
4.4 MB |
4.0 KB |
4.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_tissue)
|
4s |
1s |
1s |
1s |
214.7 MB |
2025% |
61.0 MB |
207.4 KB |
0 bytes |
216.0 KB |
1 |