succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 5s 3s 0s 1s 0 bytes 212% 77.9 KB 2.4 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 17s 15s 0s 1s 14.2 MB 101% 2.1 MB 10.2 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (HCC1395_BL) 17s 5s 2s 9s 475.6 MB 2674% 13.0 MB 338.9 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (Sig_18_Blood) 20s 6s 2s 11s 479.0 MB 3360% 15.7 MB 309.4 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_BL) 32s 1s 2s 28s 380.4 MB 586% 627.3 MB 361.5 KB 0 bytes 8.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (Sig_18_Blood) 36s 2s 3s 30s 466.5 MB 757% 713.6 MB 430.8 KB 0 bytes 8.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (HCC1395_BL;tnseq) 6s 5s - - 14.2 MB 1164% 122.8 KB 20.8 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (Sig_18_Blood;tnseq) 3s 1s - - 19.6 MB 2024% 123.8 KB 20.8 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (HCC1395_BL) 28s 12s 7s 8s 33.9 MB 281% 3.0 GB 209.2 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (Sig_18_Blood) 27s 11s 7s 8s 34.2 MB 263% 3.0 GB 216.4 KB 0 bytes 228.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (HCC1395_BL) 3s 1s - - 21.7 MB 6747% 579.1 KB 467.3 KB 0 bytes 476.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (Sig_18_Blood) 5s 3s - - 21.8 MB 7252% 636.0 KB 524.6 KB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_PON:BCFTOOLS_NORM (chip_pon) 1m 35s 7s 8s 1m 19s 48.4 MB 284% 4.0 GB 5.5 MB 0 bytes 5.7 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_PON:BCFTOOLS_SORT (chip_pon) 6s 4s 1s 1s 136.3 MB 962% 43.8 MB 44.1 MB 0 bytes 44.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (HCC1395_BL) 22s 4s 7s 10s 33.8 MB 202% 3.0 GB 198.5 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (Sig_18_Blood) 22s 4s 8s 9s 33.8 MB 172% 3.0 GB 201.0 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (HCC1395_BL) 3s 2s - - 21.3 MB 8370% 462.7 KB 353.4 KB 0 bytes 364.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (Sig_18_Blood) 5s 3s - - 21.4 MB 6192% 474.2 KB 364.2 KB 0 bytes 376.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:PRE_FILTER_CHIP_CANDIDATES (HCC1395_BL) 8s 6s 0s 1s 15.4 MB 2856% 12.7 MB 75.7 KB 0 bytes 92.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:PRE_FILTER_CHIP_CANDIDATES (Sig_18_Blood) 4s 1s 0s 2s 15.7 MB 2926% 12.8 MB 83.5 KB 0 bytes 100.0 KB 1
326 items found |
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