.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_tumor_vs_HCC1395_BL;manta)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/da7267d2f26f2391d8aab2cd41b62b/.command.log
Size: 463 bytes
Task: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_tumor_vs_HCC1395_BL;manta)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/da7267d2f26f2391d8aab2cd41b62b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/1ced65802064e2bfd95ec3fb71a2b0/HCC1395_tumor_vs_HCC1395_BL.manta.somatic_sv_custom.ann_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/da7267d2f26f2391d8aab2cd41b62b/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory