|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_BGZIP_TABIX (custom_Sig_18_tumor_normal)
|
4s |
3s |
0s |
0s |
3.3 MB |
106% |
184.7 KB |
11.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_BGZIP_TABIX (HCC1395_tumor_vs_HCC1395_BL)
|
2s |
1s |
0s |
0s |
3.4 MB |
114% |
176.4 KB |
10.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal)
|
42s |
2s |
37s |
2s |
6.8 GB |
572% |
160.6 MB |
1.8 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)
|
28s |
3s |
22s |
2s |
5.9 GB |
937% |
155.7 MB |
1.7 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (custom_Sig_18_tumor_normal)
|
6s |
3s |
2s |
0s |
157.8 MB |
613% |
44.1 MB |
86.6 KB |
0 bytes |
108.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
3s |
1s |
1s |
179.9 MB |
765% |
44.2 MB |
84.0 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_BL)
|
16s |
13s |
1s |
1s |
141.7 MB |
902% |
60.3 MB |
197.6 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_tumor)
|
28s |
1s |
24s |
2s |
248.9 MB |
750% |
60.6 MB |
204.6 KB |
0 bytes |
212.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_Blood)
|
30s |
2s |
26s |
1s |
255.4 MB |
681% |
60.6 MB |
197.6 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_tissue)
|
25s |
21s |
1s |
2s |
153.4 MB |
1938% |
60.6 MB |
207.4 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_BL)
|
11s |
7s |
0s |
3s |
9.8 MB |
106% |
109.7 MB |
2.1 MB |
0 bytes |
640.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_tumor)
|
17s |
10s |
1s |
5s |
26.4 MB |
107% |
265.3 MB |
2.2 MB |
0 bytes |
656.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_Blood)
|
22s |
17s |
0s |
4s |
9.8 MB |
109% |
135.5 MB |
2.2 MB |
0 bytes |
648.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_tissue)
|
21s |
8s |
3s |
9s |
52.9 MB |
107% |
536.2 MB |
2.2 MB |
0 bytes |
652.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
1m 47s |
42s |
1m 1s |
3s |
2.8 GB |
342% |
691.8 MB |
832.5 MB |
0 bytes |
835.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
2m 6s |
56s |
1m 7s |
2s |
2.8 GB |
280% |
692.2 MB |
832.4 MB |
0 bytes |
834.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal)
|
7s |
2s |
2s |
2s |
450.4 MB |
985% |
80.4 MB |
1.1 MB |
0 bytes |
1.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL)
|
7s |
3s |
2s |
1s |
370.1 MB |
319% |
80.2 MB |
1023.6 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal)
|
5s |
3s |
- |
- |
22.5 MB |
8235% |
283.7 KB |
62.1 KB |
0 bytes |
68.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
3s |
- |
- |
25.8 MB |
6041% |
244.8 KB |
42.7 KB |
0 bytes |
52.0 KB |
1 |