Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/dee2f22c04ae9c1843fad17c79a5bf/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/5458c198852ff06cca4fec9ea348b8/HCC1395_BL.haplotyper_rf.gt_corrected.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/dee2f22c04ae9c1843fad17c79a5bf/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory