File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/5bdbe88f52a9b67440c611a818ddf1/.command.log
Size
953 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/7d97b7f40f77793db9e7e110b30dbc/Sig_18_Blood.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/7d97b7f40f77793db9e7e110b30dbc/Sig_18_Blood.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/5bdbe88f52a9b67440c611a818ddf1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/5bdbe88f52a9b67440c611a818ddf1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/3b6c583f1c7c47598049fc429f2989/Sig_18_Blood.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/3b6c583f1c7c47598049fc429f2989/Sig_18_Blood.haplotyper.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Writing to /tmp/bcftools.iplJOe
Checking the headers and starting positions of 2 files
Merging 1 temporary files
Done
Cleaning