Work Directory

Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/9711b25537f652b916148e53ad5ff2

Files (38)

Name Size Modified
.command.begin 6 bytes Jun 04, 2026 12:33 PM
.command.err 12.0 KB Jun 04, 2026 12:33 PM
.command.log 14.7 KB Jun 04, 2026 12:33 PM
.command.out 1.7 KB Jun 04, 2026 12:33 PM
.command.run 16.2 KB Jun 04, 2026 12:33 PM
.command.sh 1.0 KB Jun 04, 2026 12:33 PM
.command.trace 279 bytes Jun 04, 2026 12:33 PM
.command.yaml 3.9 KB Jun 04, 2026 12:33 PM
.exitcode 1 byte Jun 04, 2026 12:33 PM
HCC1395_tumor_vs_HCC1395_BL.seg 564 bytes Jun 04, 2026 12:33 PM
HCC1395_tumor_vs_HCC1395_BL_gene_cnv.tsv.gz 10.0 KB Jun 04, 2026 12:33 PM
HCC1395_tumor_vs_HCC1395_BL_metrics.tsv 636 bytes Jun 04, 2026 12:33 PM
HCC1395_tumor_vs_HCC1395_BL_probe_agg.tsv.gz 184.6 KB Jun 04, 2026 12:33 PM
HCC1395_tumor_vs_HCC1395_BL_segments.tsv 1.5 KB Jun 04, 2026 12:33 PM
HCC1395_tumor_vs_HCC1395_BL_somatic.vcf 55.1 KB Jun 04, 2026 12:33 PM
blood_only/HCC1395_tumor_vs_HCC1395_BL.seg 153 bytes Jun 04, 2026 12:33 PM
blood_only/HCC1395_tumor_vs_HCC1395_BL_gene_cnv.tsv.gz 9.6 KB Jun 04, 2026 12:33 PM
blood_only/HCC1395_tumor_vs_HCC1395_BL_metrics.tsv 550 bytes Jun 04, 2026 12:33 PM
blood_only/HCC1395_tumor_vs_HCC1395_BL_probe_agg.tsv.gz 146.6 KB Jun 04, 2026 12:33 PM
blood_only/HCC1395_tumor_vs_HCC1395_BL_segments.tsv 522 bytes Jun 04, 2026 12:33 PM
blood_only/HCC1395_tumor_vs_HCC1395_BL_somatic.vcf 53.3 KB Jun 04, 2026 12:33 PM
pairs.tsv 955 bytes Jun 04, 2026 12:33 PM
plots//HCC1395_tumor_vs_HCC1395_BL_4panel.png 256.7 KB Jun 04, 2026 12:33 PM
plots//HCC1395_tumor_vs_HCC1395_BL_clone_heatmap.png 17.4 KB Jun 04, 2026 12:33 PM
plots//HCC1395_tumor_vs_HCC1395_BL_multiclone_3panel.png 91.0 KB Jun 04, 2026 12:33 PM
plots//blood_only/HCC1395_tumor_vs_HCC1395_BL_blood_4panel.png 216.3 KB Jun 04, 2026 12:33 PM
plots//blood_only/HCC1395_tumor_vs_HCC1395_BL_blood_clone_heatmap.png 17.2 KB Jun 04, 2026 12:33 PM
plots//blood_only/HCC1395_tumor_vs_HCC1395_BL_blood_multiclone_3panel.png 62.7 KB Jun 04, 2026 12:33 PM
plots//tumor_only/HCC1395_tumor_vs_HCC1395_BL_tumor_4panel.png 264.4 KB Jun 04, 2026 12:33 PM
plots//tumor_only/HCC1395_tumor_vs_HCC1395_BL_tumor_clone_heatmap.png 18.0 KB Jun 04, 2026 12:33 PM
plots//tumor_only/HCC1395_tumor_vs_HCC1395_BL_tumor_multiclone_3panel.png 84.9 KB Jun 04, 2026 12:33 PM
tumor_only/HCC1395_tumor_vs_HCC1395_BL.seg 785 bytes Jun 04, 2026 12:33 PM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_gene_cnv.tsv.gz 10.2 KB Jun 04, 2026 12:33 PM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_metrics.tsv 478 bytes Jun 04, 2026 12:33 PM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_probe_agg.tsv.gz 147.6 KB Jun 04, 2026 12:33 PM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_segments.tsv 2.2 KB Jun 04, 2026 12:33 PM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_somatic.vcf 53.9 KB Jun 04, 2026 12:33 PM
versions.yml 119 bytes Jun 04, 2026 12:33 PM