succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal) 2s 1s - - 3.2 MB 6193% 317.5 KB 65.0 KB 0 bytes 72.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL) 2s 1s - - 3.3 MB 8808% 258.7 KB 44.6 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (custom_Sig_18_tumor_normal;snv_indel) 30s 1s 9s 20s 81.5 MB 116% 3.1 GB 2.5 MB 1.3 GB 312.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 21s 1s 8s 12s 86.8 MB 109% 3.1 GB 1.6 MB 2.3 GB 264.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (custom_Sig_18_tumor_normal) 10s 9s 0s 0s 5.6 MB 1958% 138.7 KB 712 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (HCC1395_tumor_vs_HCC1395_BL) 4s 3s 0s 0s 3.8 MB 356% 109.2 KB 717 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (custom_Sig_18_tumor_normal) 5s 2s 0s 2s 12.2 MB 102% 8.9 MB 1.1 MB 0 bytes 1.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (HCC1395_tumor_vs_HCC1395_BL) 10s 8s 0s 1s 12.6 MB 101% 8.5 MB 705.8 KB 0 bytes 712.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (custom_Sig_18_tumor_normal) 8s 7s 0s 0s 12.6 MB 99% 2.3 MB 1.1 MB 0 bytes 1.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (HCC1395_tumor_vs_HCC1395_BL) 5s 4s 0s 0s 13.2 MB 103% 1.8 MB 692.6 KB 0 bytes 704.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (custom_Sig_18_tumor_normal) 24s 6s 8s 9s 59.9 MB 305% 3.0 GB 581.9 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (HCC1395_tumor_vs_HCC1395_BL) 23s 6s 7s 9s 60.3 MB 426% 3.0 GB 558.0 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (custom_Sig_18_tumor_normal) 24s 7s 7s 9s 86.4 MB 450% 3.0 GB 1.5 MB 0 bytes 276.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (HCC1395_tumor_vs_HCC1395_BL) 20s 2s 7s 10s 85.9 MB 393% 3.0 GB 1.1 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (custom_Sig_18_tumor_normal;snv_indel) 6s 4s - - 3.2 MB 91% 217.9 KB 5.5 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 6s 4s - - 3.2 MB 91% 167.7 KB 4.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (custom_Sig_18_tumor_normal) 7s 5s 0s 1s 13.2 MB 108% 2.4 MB 1.1 MB 0 bytes 1.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (HCC1395_tumor_vs_HCC1395_BL) 6s 5s 0s 0s 12.6 MB 105% 2.0 MB 706.3 KB 0 bytes 724.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:WHATSHAP (custom_Sig_18_tumor_normal:chr21) 1m 14s 3s 1m 2s 9s 385.2 MB 102% 637.4 MB 498.0 KB 4.0 KB 504.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:WHATSHAP (HCC1395_tumor_vs_HCC1395_BL:chr21) 35s 1s 24s 10s 154.4 MB 100% 366.4 MB 382.1 KB 0 bytes 392.0 KB 1
326 items found |
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