.command.err - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/1f0126c5cf65f6cbfa62c44e20699c/.command.err
Size: 252 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)
Attempt

Content

Lines   total/split/joined/realigned/skipped:	0/0/0/0/0
[INFO] Indexing tumor force-call VCF: tumor_norm.vcf.gz
[INFO] Tumor: 0 alleles indexed
[INFO] Processed 291 variants
[INFO] Blood: 291 annotated, 0 missing
[INFO] Tumor: 0 annotated, 291 missing