succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal) 3s 1s - - 3.2 MB 7759% 270.3 KB 48.6 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL) 4s 2s - - 3.1 MB 8344% 251.5 KB 41.9 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (custom_Sig_18_tumor_normal;snv_indel) 23s 1s 9s 13s 84.5 MB 111% 3.1 GB 1.9 MB 1.9 GB 276.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 24s 1s 8s 15s 81.5 MB 107% 3.1 GB 1.5 MB 1.8 GB 256.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (custom_Sig_18_tumor_normal) 4s 3s 0s 0s 5.4 MB 3069% 165.1 KB 724 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (HCC1395_tumor_vs_HCC1395_BL) 4s 3s 0s 0s 5.5 MB 1820% 164.5 KB 721 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (custom_Sig_18_tumor_normal) 4s 1s 0s 2s 17.3 MB 99% 8.6 MB 830.9 KB 0 bytes 840.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (HCC1395_tumor_vs_HCC1395_BL) 4s 1s 0s 2s 17.2 MB 101% 8.4 MB 650.2 KB 0 bytes 660.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (custom_Sig_18_tumor_normal) 3s 1s 0s 1s 17.4 MB 94% 2.0 MB 816.3 KB 0 bytes 828.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (HCC1395_tumor_vs_HCC1395_BL) 3s 2s 0s 0s 17.1 MB 99% 1.8 MB 637.6 KB 0 bytes 648.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (custom_Sig_18_tumor_normal) 19s 3s 7s 8s 59.9 MB 443% 3.0 GB 596.6 KB 0 bytes 228.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (HCC1395_tumor_vs_HCC1395_BL) 18s 2s 7s 8s 60.3 MB 415% 3.0 GB 562.7 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (custom_Sig_18_tumor_normal) 20s 2s 7s 10s 86.2 MB 472% 3.0 GB 1.2 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (HCC1395_tumor_vs_HCC1395_BL) 19s 3s 7s 8s 86.0 MB 452% 3.0 GB 1.1 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (custom_Sig_18_tumor_normal;snv_indel) 2s 1s - - 3.3 MB 99% 191.5 KB 4.9 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 3s 1s - - 3.2 MB 98% 172.6 KB 4.5 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (custom_Sig_18_tumor_normal) 3s 1s 0s 1s 17.0 MB 103% 2.2 MB 831.5 KB 0 bytes 852.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (HCC1395_tumor_vs_HCC1395_BL) 3s 1s 0s 1s 17.0 MB 94% 2.0 MB 650.7 KB 0 bytes 672.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:WHATSHAP (custom_Sig_18_tumor_normal:chr21) 1m 52s 3s 1m 40s 9s 278.8 MB 100% 776.1 MB 404.5 KB 0 bytes 412.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:WHATSHAP (HCC1395_tumor_vs_HCC1395_BL:chr21) 52s 3s 39s 10s 157.5 MB 100% 414.9 MB 369.5 KB 0 bytes 376.0 KB 1
306 items found |
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