Clear
Retried
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_Blood) 57s 44s 4s 9s 8.9 MB 131% 199.3 MB 128.0 KB 0 bytes 128.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_Blood) 1m 32s 1m 18s 4s 9s 637.8 MB 217% 157.5 MB 1.5 MB 0 bytes 1.6 MB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_Blood) 1m 20s 46s 25s 9s 1.9 GB 108% 213.5 MB 7.4 MB 198.4 MB 7.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (Sig_18_Blood) 1m 59s 1m 33s 16s 9s 455.7 MB 180% 3.2 GB 187.7 KB 0 bytes 196.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:BCFTOOLS_QUERY (Sig_18_Blood) 4s 2s 0s 1s 32.3 MB 4564% 165.0 KB 1.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood) 21s 17s 3s 1s 298.2 MB 338% 95.9 MB 737.2 KB 0 bytes 744.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (Sig_18_Blood) 1m 12s 40s 5s 26s 502.8 MB 868% 778.3 MB 430.4 KB 0 bytes 8.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_Blood) 49s 44s - - 3.3 MB 78% 2.2 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (Sig_18_Blood) 13s 1s 3s 8s 478.0 MB 3158% 13.1 MB 326.5 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:DIFF_DV_SENTIEON (Sig_18_Blood) 9s 7s 0s 1s 17.0 MB 4696% 8.3 MB 18.1 KB 0 bytes 28.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood) 4s 2s 0s 1s 3.6 MB 11760% 1.1 MB 811.6 KB 0 bytes 96.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (Sig_18_Blood) 19s 2s 7s 9s 34.4 MB 287% 3.0 GB 212.6 KB 0 bytes 224.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (Sig_18_Blood) 3s 2s 1s 0s 21.5 MB 7333% 635.9 KB 524.8 KB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SPLIT_MULTIALLELIC (Sig_18_Blood) 19s 3s 7s 8s 34.0 MB 284% 3.0 GB 197.1 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:INDEL_ENTROPY_ANNOTATION (Sig_18_Blood) 13s 9s 0s 3s 15.4 MB 3449% 31.2 MB 340.0 KB 0 bytes 348.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:SENTIEON_HAPLOTYPER_RF_FILTER (Sig_18_Blood) 8s 1s 3s 3s 1.3 GB 745% 81.2 MB 58.3 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:GT_CORRECTION (Sig_18_Blood) 7s 1s 2s 3s 1.7 GB 827% 68.6 MB 42.8 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (Sig_18_Blood) 19s 2s 7s 9s 33.9 MB 290% 3.0 GB 200.9 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (Sig_18_Blood) 3s 1s - - 21.2 MB 7909% 475.4 KB 364.0 KB 0 bytes 376.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood) 9s 7s 0s 1s 20.1 MB 4527% 11.2 MB 57.8 KB 0 bytes 64.0 KB 1
27 items found |
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