succeeded NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet) 46s 45s 0s 0s 0 bytes 174% 79.3 KB 2.5 KB 0 bytes 4.0 KB 1
succeeded NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation) 40s 38s 0s 1s 14.4 MB 104% 2.1 MB 10.1 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (HCC1395_BL) 15s 1s 4s 9s 479.5 MB 3237% 10.3 MB 429.4 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (Sig_18_Blood) 13s 1s 3s 8s 478.0 MB 3158% 13.1 MB 326.5 KB 0 bytes 25.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_BL) 1m 8s 39s 3s 25s 396.3 MB 766% 675.8 MB 366.8 KB 0 bytes 8.0 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (Sig_18_Blood) 1m 12s 40s 5s 26s 502.8 MB 868% 778.3 MB 430.4 KB 0 bytes 8.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (HCC1395_BL;tnseq) 3s 1s - - 23.2 MB 8349% 133.4 KB 20.8 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (Sig_18_Blood;tnseq) 3s 1s - - 21.7 MB 7905% 133.4 KB 20.8 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (HCC1395_BL) 19s 2s 7s 9s 34.1 MB 287% 3.0 GB 204.6 KB 0 bytes 216.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (Sig_18_Blood) 19s 2s 7s 9s 34.4 MB 287% 3.0 GB 212.6 KB 0 bytes 224.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (HCC1395_BL) 3s 2s 1s 0s 22.8 MB 5593% 567.3 KB 455.9 KB 0 bytes 468.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (Sig_18_Blood) 3s 2s 1s 0s 21.5 MB 7333% 635.9 KB 524.8 KB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_PON:BCFTOOLS_NORM (chip_pon) 1m 46s 1m 29s 7s 9s 43.4 MB 273% 4.0 GB 5.5 MB 0 bytes 5.5 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_PON:BCFTOOLS_SORT (chip_pon) 4s 1s 1s 2s 20.9 MB 1591% 43.8 MB 44.1 MB 0 bytes 44.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (HCC1395_BL) 19s 2s 7s 9s 34.2 MB 288% 3.0 GB 198.3 KB 0 bytes 208.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_NORM (Sig_18_Blood) 19s 2s 7s 9s 33.9 MB 290% 3.0 GB 200.9 KB 0 bytes 212.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (HCC1395_BL) 3s 1s - - 23.7 MB 6488% 464.4 KB 353.1 KB 0 bytes 360.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_GERMLINE:BCFTOOLS_SORT (Sig_18_Blood) 3s 1s - - 21.2 MB 7909% 475.4 KB 364.0 KB 0 bytes 376.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:PRE_FILTER_CHIP_CANDIDATES (HCC1395_BL) 3s 1s 0s 1s 15.8 MB 3017% 12.7 MB 71.2 KB 0 bytes 88.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:PRE_FILTER_CHIP_CANDIDATES (Sig_18_Blood) 4s 1s 0s 2s 15.8 MB 2953% 12.8 MB 78.8 KB 0 bytes 92.0 KB 1
306 items found |
1 2 3 ... 15 16