File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/4e855a5cee6c5d000bb66818abf6f3/.command.log
Size
945 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (HCC1395_BL)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/10ef1f4a3f2b31709f89af7ec2f6fc/HCC1395_BL.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/4e855a5cee6c5d000bb66818abf6f3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e7/4e855a5cee6c5d000bb66818abf6f3/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/10ef1f4a3f2b31709f89af7ec2f6fc/HCC1395_BL.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/bf7e0fc955e5696946632cfec3a91d/HCC1395_BL.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/04/bf7e0fc955e5696946632cfec3a91d/HCC1395_BL.haplotyper.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Writing to /tmp/bcftools.ppZcde
Checking the headers and starting positions of 2 files
Merging 1 temporary files
Done
Cleaning