|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal)
|
3s |
2s |
0s |
0s |
5.5 MB |
2424% |
117.2 KB |
689 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
2s |
0s |
0s |
5.6 MB |
2346% |
117.1 KB |
689 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal)
|
3s |
1s |
- |
- |
22.8 MB |
6560% |
205.9 KB |
21.4 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
2s |
- |
- |
23.1 MB |
5556% |
189.2 KB |
21.3 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal)
|
1m 42s |
1m 30s |
7s |
4s |
3.9 GB |
1497% |
392.4 MB |
19.7 MB |
0 bytes |
19.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL)
|
1m 40s |
1m 30s |
5s |
4s |
3.8 GB |
855% |
299.2 MB |
8.8 MB |
0 bytes |
8.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal)
|
1m 31s |
1m 27s |
- |
- |
12.2 MB |
99% |
5.9 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL)
|
1m 31s |
1m 28s |
- |
- |
12.1 MB |
108% |
4.7 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal)
|
1m 9s |
53s |
13s |
2s |
971.4 MB |
284% |
89.3 MB |
34.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL)
|
1m 12s |
53s |
15s |
3s |
967.5 MB |
261% |
89.3 MB |
34.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal)
|
35s |
31s |
2s |
1s |
221.5 MB |
1003% |
41.8 MB |
4.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL)
|
34s |
31s |
2s |
0s |
221.5 MB |
904% |
41.8 MB |
5.1 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
1m 47s |
51s |
52s |
3s |
2.9 GB |
332% |
695.6 MB |
853.9 MB |
0 bytes |
856.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
1m 48s |
52s |
52s |
3s |
2.8 GB |
325% |
694.7 MB |
848.9 MB |
0 bytes |
851.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (custom_Sig_18_tumor_normal)
|
1m 27s |
52s |
32s |
2s |
1.2 GB |
430% |
480.3 MB |
235.6 MB |
0 bytes |
238.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (HCC1395_tumor_vs_HCC1395_BL)
|
1m 26s |
51s |
32s |
2s |
1.2 GB |
422% |
480.3 MB |
235.6 MB |
0 bytes |
238.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal)
|
7s |
2s |
2s |
2s |
403.1 MB |
764% |
80.3 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL)
|
7s |
2s |
2s |
2s |
427.4 MB |
999% |
80.2 MB |
1011.6 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal)
|
3s |
1s |
- |
- |
23.4 MB |
8642% |
252.3 KB |
46.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
1s |
- |
- |
21.5 MB |
8528% |
238.9 KB |
40.3 KB |
0 bytes |
48.0 KB |
1 |