succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal) 2s 1s 1s 0s 20.2 MB 7831% 270.2 KB 48.6 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL) 3s 2s - - 21.5 MB 7835% 251.5 KB 41.9 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (custom_Sig_18_tumor_normal;snv_indel) 21s 1s 8s 12s 81.5 MB 112% 3.1 GB 1.9 MB 2.2 GB 276.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 23s 2s 9s 12s 81.4 MB 107% 3.1 GB 1.5 MB 1.8 GB 256.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (custom_Sig_18_tumor_normal) 4s 3s 0s 0s 5.6 MB 2433% 119.0 KB 726 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (HCC1395_tumor_vs_HCC1395_BL) 4s 2s 0s 1s 5.7 MB 2651% 118.2 KB 723 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (custom_Sig_18_tumor_normal) 3s 1s 0s 1s 16.6 MB 100% 8.6 MB 830.9 KB 0 bytes 840.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (HCC1395_tumor_vs_HCC1395_BL) 4s 1s 0s 2s 13.0 MB 102% 8.4 MB 650.2 KB 0 bytes 660.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (custom_Sig_18_tumor_normal) 3s 2s 0s 0s 17.3 MB 94% 2.0 MB 816.2 KB 0 bytes 828.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (HCC1395_tumor_vs_HCC1395_BL) 3s 1s 0s 1s 17.4 MB 98% 1.8 MB 637.6 KB 0 bytes 648.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (custom_Sig_18_tumor_normal) 24s 3s 7s 13s 60.3 MB 398% 3.0 GB 596.6 KB 0 bytes 228.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (HCC1395_tumor_vs_HCC1395_BL) 19s 2s 7s 9s 60.1 MB 412% 3.0 GB 562.7 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (custom_Sig_18_tumor_normal) 18s 2s 7s 8s 85.8 MB 443% 3.0 GB 1.2 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (HCC1395_tumor_vs_HCC1395_BL) 19s 3s 7s 8s 85.7 MB 435% 3.0 GB 1.1 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (custom_Sig_18_tumor_normal;snv_indel) 3s 1s - - 3.3 MB 113% 191.5 KB 4.9 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 3s 1s - - 3.2 MB 112% 172.6 KB 4.5 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (custom_Sig_18_tumor_normal) 3s 1s 0s 1s 17.2 MB 91% 2.1 MB 831.5 KB 0 bytes 852.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (HCC1395_tumor_vs_HCC1395_BL) 3s 1s 0s 1s 16.8 MB 96% 1.9 MB 650.7 KB 0 bytes 672.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:WHATSHAP (custom_Sig_18_tumor_normal:chr21) 1m 52s 2s 1m 40s 10s 290.5 MB 100% 776.1 MB 404.6 KB 0 bytes 412.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:WHATSHAP (HCC1395_tumor_vs_HCC1395_BL:chr21) 54s 2s 43s 9s 159.5 MB 100% 414.9 MB 369.4 KB 0 bytes 376.0 KB 1
306 items found |
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