File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/80ea299f3d08a608ceb75c01c263a6/.command.log
Size
953 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/09585e19d95adb23e67f22d52059e4/Sig_18_Blood.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/09585e19d95adb23e67f22d52059e4/Sig_18_Blood.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/80ea299f3d08a608ceb75c01c263a6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/80ea299f3d08a608ceb75c01c263a6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/f94e96a5d3b0a97732fa01f43224c7/Sig_18_Blood.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/f94e96a5d3b0a97732fa01f43224c7/Sig_18_Blood.haplotyper.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Checking the headers and starting positions of 2 files
Writing to /tmp/bcftools.hOUwjm
Merging 1 temporary files
Done
Cleaning