|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (HCC1395_tumor)
|
33s |
15s |
8s |
10s |
9.0 MB |
130% |
318.0 MB |
131.5 KB |
0 bytes |
132.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (HCC1395_tumor)
|
49s |
34s |
4s |
10s |
557.1 MB |
276% |
183.4 MB |
2.2 MB |
0 bytes |
2.2 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (HCC1395_tumor)
|
41s |
3s |
28s |
10s |
1.9 GB |
113% |
333.7 MB |
9.7 MB |
310.4 MB |
9.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (HCC1395_tumor)
|
12s |
8s |
1s |
2s |
46.5 MB |
222% |
352.7 MB |
25.2 MB |
0 bytes |
6.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_tumor)
|
11s |
7s |
2s |
1s |
25.4 MB |
103% |
321.0 MB |
2.2 MB |
0 bytes |
656.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (HCC1395_tumor)
|
7s |
3s |
- |
- |
3.3 MB |
121% |
2.3 MB |
108.4 KB |
0 bytes |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_tumor)
|
6s |
3s |
1s |
1s |
187.7 MB |
1951% |
61.8 MB |
205.0 KB |
0 bytes |
212.0 KB |
1 |