.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/b8efd68f755619aa98e67c2dbbc3f7/.command.log
Size: 444 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/3d6b48b3a6101fa03b88dbc1249124/HCC1395_BL.tnseq_tumor_only.filtered_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/b8efd68f755619aa98e67c2dbbc3f7/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/b8efd68f755619aa98e67c2dbbc3f7/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory