Work Directory

Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bb/ef84bfdf4200d61aed89879e3d97c7

Files (38)

Name Size Modified
.command.begin 6 bytes Jun 05, 2026 8:20 AM
.command.err 12.0 KB Jun 05, 2026 8:20 AM
.command.log 14.7 KB Jun 05, 2026 8:20 AM
.command.out 1.7 KB Jun 05, 2026 8:20 AM
.command.run 16.2 KB Jun 05, 2026 8:20 AM
.command.sh 1.0 KB Jun 05, 2026 8:20 AM
.command.trace 259 bytes Jun 05, 2026 8:20 AM
.command.yaml 3.9 KB Jun 05, 2026 8:20 AM
.exitcode 1 byte Jun 05, 2026 8:20 AM
HCC1395_tumor_vs_HCC1395_BL.seg 396 bytes Jun 05, 2026 8:20 AM
HCC1395_tumor_vs_HCC1395_BL_gene_cnv.tsv.gz 10.0 KB Jun 05, 2026 8:20 AM
HCC1395_tumor_vs_HCC1395_BL_metrics.tsv 635 bytes Jun 05, 2026 8:20 AM
HCC1395_tumor_vs_HCC1395_BL_probe_agg.tsv.gz 187.9 KB Jun 05, 2026 8:20 AM
HCC1395_tumor_vs_HCC1395_BL_segments.tsv 1.0 KB Jun 05, 2026 8:20 AM
HCC1395_tumor_vs_HCC1395_BL_somatic.vcf 53.7 KB Jun 05, 2026 8:20 AM
blood_only/HCC1395_tumor_vs_HCC1395_BL.seg 153 bytes Jun 05, 2026 8:20 AM
blood_only/HCC1395_tumor_vs_HCC1395_BL_gene_cnv.tsv.gz 9.6 KB Jun 05, 2026 8:20 AM
blood_only/HCC1395_tumor_vs_HCC1395_BL_metrics.tsv 532 bytes Jun 05, 2026 8:20 AM
blood_only/HCC1395_tumor_vs_HCC1395_BL_probe_agg.tsv.gz 148.7 KB Jun 05, 2026 8:20 AM
blood_only/HCC1395_tumor_vs_HCC1395_BL_segments.tsv 498 bytes Jun 05, 2026 8:20 AM
blood_only/HCC1395_tumor_vs_HCC1395_BL_somatic.vcf 53.6 KB Jun 05, 2026 8:20 AM
pairs.tsv 1.0 KB Jun 05, 2026 8:20 AM
plots//HCC1395_tumor_vs_HCC1395_BL_4panel.png 257.0 KB Jun 05, 2026 8:20 AM
plots//HCC1395_tumor_vs_HCC1395_BL_clone_heatmap.png 17.5 KB Jun 05, 2026 8:20 AM
plots//HCC1395_tumor_vs_HCC1395_BL_multiclone_3panel.png 84.8 KB Jun 05, 2026 8:20 AM
plots//blood_only/HCC1395_tumor_vs_HCC1395_BL_blood_4panel.png 213.1 KB Jun 05, 2026 8:20 AM
plots//blood_only/HCC1395_tumor_vs_HCC1395_BL_blood_clone_heatmap.png 17.2 KB Jun 05, 2026 8:20 AM
plots//blood_only/HCC1395_tumor_vs_HCC1395_BL_blood_multiclone_3panel.png 62.7 KB Jun 05, 2026 8:20 AM
plots//tumor_only/HCC1395_tumor_vs_HCC1395_BL_tumor_4panel.png 261.1 KB Jun 05, 2026 8:20 AM
plots//tumor_only/HCC1395_tumor_vs_HCC1395_BL_tumor_clone_heatmap.png 18.0 KB Jun 05, 2026 8:20 AM
plots//tumor_only/HCC1395_tumor_vs_HCC1395_BL_tumor_multiclone_3panel.png 87.5 KB Jun 05, 2026 8:20 AM
tumor_only/HCC1395_tumor_vs_HCC1395_BL.seg 480 bytes Jun 05, 2026 8:20 AM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_gene_cnv.tsv.gz 10.0 KB Jun 05, 2026 8:20 AM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_metrics.tsv 476 bytes Jun 05, 2026 8:20 AM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_probe_agg.tsv.gz 152.0 KB Jun 05, 2026 8:20 AM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_segments.tsv 1.3 KB Jun 05, 2026 8:20 AM
tumor_only/HCC1395_tumor_vs_HCC1395_BL_somatic.vcf 54.4 KB Jun 05, 2026 8:20 AM
versions.yml 119 bytes Jun 05, 2026 8:20 AM