|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal)
|
4s |
3s |
0s |
0s |
5.3 MB |
2388% |
222.9 KB |
703 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
4s |
0s |
0s |
5.6 MB |
3072% |
223.6 KB |
703 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal)
|
4s |
2s |
- |
- |
21.5 MB |
7054% |
219.5 KB |
21.4 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
4s |
3s |
- |
- |
20.0 MB |
6596% |
202.9 KB |
21.3 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal)
|
14s |
2s |
7s |
4s |
3.9 GB |
1006% |
395.7 MB |
19.7 MB |
0 bytes |
19.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL)
|
40s |
30s |
6s |
3s |
1.4 GB |
1303% |
300.8 MB |
8.8 MB |
0 bytes |
8.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal)
|
6s |
2s |
- |
- |
12.4 MB |
103% |
5.9 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
2s |
- |
- |
12.1 MB |
115% |
4.7 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal)
|
55s |
40s |
12s |
2s |
970.0 MB |
300% |
89.3 MB |
34.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL)
|
1m 2s |
47s |
12s |
2s |
966.8 MB |
302% |
89.3 MB |
34.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal)
|
34s |
30s |
2s |
1s |
340.9 MB |
862% |
41.8 MB |
4.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL)
|
36s |
33s |
2s |
0s |
221.9 MB |
1025% |
41.8 MB |
5.1 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:BGZIP_TABIX_BLOOD_ONLY (custom_Sig_18_tumor_normal)
|
2s |
1s |
0s |
0s |
3.4 MB |
92% |
198.1 KB |
10.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:BGZIP_TABIX_BLOOD_ONLY (HCC1395_tumor_vs_HCC1395_BL)
|
4s |
2s |
0s |
1s |
3.4 MB |
87% |
290.1 KB |
10.7 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:BGZIP_TABIX_TUMOR_ONLY (custom_Sig_18_tumor_normal)
|
2s |
1s |
0s |
0s |
3.3 MB |
78% |
200.7 KB |
11.2 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:BGZIP_TABIX_TUMOR_ONLY (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
2s |
0s |
0s |
3.4 MB |
116% |
198.1 KB |
10.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (HCC1395_BL)
|
15s |
11s |
0s |
3s |
22.6 MB |
224% |
187.7 MB |
18.9 MB |
0 bytes |
5.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (HCC1395_tumor)
|
12s |
8s |
1s |
2s |
46.5 MB |
222% |
352.7 MB |
25.2 MB |
0 bytes |
6.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_Blood)
|
11s |
8s |
1s |
1s |
23.4 MB |
227% |
233.2 MB |
21.3 MB |
0 bytes |
5.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_tissue)
|
18s |
10s |
3s |
4s |
69.7 MB |
222% |
742.6 MB |
42.4 MB |
0 bytes |
17.7 MB |
1 |