|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_BGZIP_TABIX (custom_Sig_18_tumor_normal)
|
9s |
7s |
0s |
1s |
3.3 MB |
86% |
199.4 KB |
11.0 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_BGZIP_TABIX (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
7s |
0s |
0s |
3.4 MB |
85% |
198.0 KB |
10.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal)
|
23s |
1s |
18s |
3s |
5.9 GB |
1230% |
162.6 MB |
1.7 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)
|
17s |
1s |
12s |
3s |
4.5 GB |
1650% |
157.0 MB |
1.7 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (custom_Sig_18_tumor_normal)
|
10s |
6s |
1s |
2s |
201.2 MB |
964% |
44.5 MB |
84.3 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
2s |
1s |
1s |
201.5 MB |
913% |
44.5 MB |
84.6 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_BL)
|
6s |
3s |
1s |
1s |
205.2 MB |
1942% |
61.8 MB |
197.8 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_tumor)
|
6s |
3s |
1s |
1s |
187.7 MB |
1951% |
61.8 MB |
205.0 KB |
0 bytes |
212.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_Blood)
|
6s |
3s |
1s |
1s |
169.5 MB |
1882% |
61.8 MB |
197.2 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_tissue)
|
6s |
3s |
1s |
1s |
206.9 MB |
1965% |
61.8 MB |
208.6 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_BL)
|
23s |
19s |
0s |
3s |
10.1 MB |
104% |
162.0 MB |
2.1 MB |
0 bytes |
644.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_tumor)
|
11s |
7s |
2s |
1s |
25.4 MB |
103% |
321.0 MB |
2.2 MB |
0 bytes |
656.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_Blood)
|
11s |
8s |
1s |
1s |
21.4 MB |
104% |
205.2 MB |
2.2 MB |
0 bytes |
648.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_tissue)
|
16s |
8s |
4s |
3s |
58.2 MB |
102% |
693.9 MB |
2.2 MB |
0 bytes |
652.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
1m 39s |
40s |
55s |
3s |
2.9 GB |
350% |
696.7 MB |
854.0 MB |
0 bytes |
856.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
1m 41s |
45s |
51s |
4s |
2.9 GB |
416% |
696.3 MB |
848.9 MB |
0 bytes |
851.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal)
|
7s |
2s |
2s |
2s |
430.6 MB |
906% |
80.3 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
3s |
2s |
2s |
430.5 MB |
912% |
80.2 MB |
1011.6 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal)
|
4s |
2s |
- |
- |
21.2 MB |
7988% |
265.4 KB |
46.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
2s |
- |
- |
21.5 MB |
7970% |
252.6 KB |
40.3 KB |
0 bytes |
48.0 KB |
1 |