Work Directory

Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal)
Attempt
1
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/ac6d9512d4af764498a345612eafa3

Files (38)

Name Size Modified
.command.begin 6 bytes Jun 05, 2026 8:20 AM
.command.err 6.2 KB Jun 05, 2026 8:20 AM
.command.log 9.1 KB Jun 05, 2026 8:20 AM
.command.out 1.9 KB Jun 05, 2026 8:20 AM
.command.run 16.1 KB Jun 05, 2026 8:20 AM
.command.sh 1021 bytes Jun 05, 2026 8:20 AM
.command.trace 259 bytes Jun 05, 2026 8:20 AM
.command.yaml 3.9 KB Jun 05, 2026 8:20 AM
.exitcode 1 byte Jun 05, 2026 8:20 AM
blood_only/custom_Sig_18_tumor_normal.seg 605 bytes Jun 05, 2026 8:20 AM
blood_only/custom_Sig_18_tumor_normal_gene_cnv.tsv.gz 9.9 KB Jun 05, 2026 8:20 AM
blood_only/custom_Sig_18_tumor_normal_metrics.tsv 545 bytes Jun 05, 2026 8:20 AM
blood_only/custom_Sig_18_tumor_normal_probe_agg.tsv.gz 151.1 KB Jun 05, 2026 8:20 AM
blood_only/custom_Sig_18_tumor_normal_segments.tsv 1.6 KB Jun 05, 2026 8:20 AM
blood_only/custom_Sig_18_tumor_normal_somatic.vcf 54.2 KB Jun 05, 2026 8:20 AM
custom_Sig_18_tumor_normal.seg 391 bytes Jun 05, 2026 8:20 AM
custom_Sig_18_tumor_normal_gene_cnv.tsv.gz 9.9 KB Jun 05, 2026 8:20 AM
custom_Sig_18_tumor_normal_metrics.tsv 641 bytes Jun 05, 2026 8:20 AM
custom_Sig_18_tumor_normal_probe_agg.tsv.gz 191.0 KB Jun 05, 2026 8:20 AM
custom_Sig_18_tumor_normal_segments.tsv 1.0 KB Jun 05, 2026 8:20 AM
custom_Sig_18_tumor_normal_somatic.vcf 55.0 KB Jun 05, 2026 8:20 AM
pairs.tsv 1.0 KB Jun 05, 2026 8:20 AM
plots//blood_only/custom_Sig_18_tumor_normal_blood_4panel.png 250.7 KB Jun 05, 2026 8:20 AM
plots//blood_only/custom_Sig_18_tumor_normal_blood_clone_heatmap.png 16.4 KB Jun 05, 2026 8:20 AM
plots//blood_only/custom_Sig_18_tumor_normal_blood_multiclone_3panel.png 60.5 KB Jun 05, 2026 8:20 AM
plots//custom_Sig_18_tumor_normal_4panel.png 244.3 KB Jun 05, 2026 8:20 AM
plots//custom_Sig_18_tumor_normal_clone_heatmap.png 16.4 KB Jun 05, 2026 8:20 AM
plots//custom_Sig_18_tumor_normal_multiclone_3panel.png 83.8 KB Jun 05, 2026 8:20 AM
plots//tumor_only/custom_Sig_18_tumor_normal_tumor_4panel.png 262.4 KB Jun 05, 2026 8:20 AM
plots//tumor_only/custom_Sig_18_tumor_normal_tumor_clone_heatmap.png 17.0 KB Jun 05, 2026 8:20 AM
plots//tumor_only/custom_Sig_18_tumor_normal_tumor_multiclone_3panel.png 97.2 KB Jun 05, 2026 8:20 AM
tumor_only/custom_Sig_18_tumor_normal.seg 1.2 KB Jun 05, 2026 8:20 AM
tumor_only/custom_Sig_18_tumor_normal_gene_cnv.tsv.gz 10.6 KB Jun 05, 2026 8:20 AM
tumor_only/custom_Sig_18_tumor_normal_metrics.tsv 481 bytes Jun 05, 2026 8:20 AM
tumor_only/custom_Sig_18_tumor_normal_probe_agg.tsv.gz 153.3 KB Jun 05, 2026 8:20 AM
tumor_only/custom_Sig_18_tumor_normal_segments.tsv 3.2 KB Jun 05, 2026 8:20 AM
tumor_only/custom_Sig_18_tumor_normal_somatic.vcf 56.5 KB Jun 05, 2026 8:20 AM
versions.yml 119 bytes Jun 05, 2026 8:20 AM