#!/bin/bash -Ceuo pipefail tabix \ --threads 1 \ \ HCC1395_tumor_vs_HCC1395_BL.manta.somatic_sv_custom.ann_snpEff_VEP.ann.vcf.gz cat <<-END_VERSIONS > versions.yml "NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_MERGE:TABIX_TABIX": tabix: $(echo $(tabix -h 2>&1) | sed 's/^.*Version: //; s/ .*$//') END_VERSIONS