File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/be7f49693c4b857818360da246f377/.command.log
Size
953 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/36aea6065a9ab0147e6c4a6d6f2e7e/Sig_18_Blood.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/36aea6065a9ab0147e6c4a6d6f2e7e/Sig_18_Blood.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/be7f49693c4b857818360da246f377/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/be7f49693c4b857818360da246f377/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/c9983d4db96f696b33af9c858290df/Sig_18_Blood.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/c9983d4db96f696b33af9c858290df/Sig_18_Blood.haplotyper.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Checking the headers and starting positions of 2 files
Writing to /tmp/bcftools.3gcXw4
Merging 1 temporary files
Done
Cleaning