pair_id,tumor_sample,normal_sample,contamination_normal_contamination_pct,contamination_tumor_contamination_pct,identity_matched,identity_tumor_normal_correlation,normal_deconflict_chip_germ_chip_wins,normal_deconflict_chip_germ_germ_wins,normal_deconflict_chip_germ_suppress_both,normal_deconflict_chip_somatic_suspect,normal_deconflict_germ_som_germ_wins,normal_deconflict_germ_som_suppress_both,normal_deconflict_total_chip_germ_conflicts,normal_deconflict_total_germ_som_conflicts,normal_germline_cnv_cnv_call_status,normal_germline_cnv_list_of_abnormal_ploidy_chr,normal_germline_cnv_low_coverage_sample_or_batch,normal_germline_cnv_num_del,normal_germline_cnv_num_del_abnormal_ploidy_chr,normal_germline_cnv_num_dup,normal_germline_cnv_num_dup_abnormal_ploidy_chr,normal_germline_cnv_num_lowconf_del,normal_germline_cnv_num_lowconf_del_abnormal_ploidy_chr,normal_germline_cnv_num_lowconf_dup,normal_germline_cnv_num_lowconf_dup_abnormal_ploidy_chr,strelka_num_indels,strelka_num_snps,tmb_effective_coding_region_size,tmb_filtered_variant_count,tmb_non_synonymous_count
HCC1395_tumor_vs_HCC1395_BL,HCC1395_tumor,HCC1395_BL,0.0,0.254,True,0.9585,0,0,0,0,0,0,0,0,PASS,,False,1,0,0,0,0,0,0,0,42,300,0.34,3.0,1.0
Sig_18_tissue_vs_Sig_18_Blood,,,0.0,0.007,,,,,,,,,,,,,,,,,,,,,,,,,,
custom_Sig_18_tumor_normal,Sig_18_tissue,Sig_18_Blood,,,True,0.9422,0,0,0,0,0,0,0,0,PASS,,False,1,0,0,0,0,0,0,0,88,237,0.34,5.0,2.0