Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/302dabc0c3d8067662a53234e607f7/Sig_18_Blood_custom.ann_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/fd8b678c7058ea864719897e9297d1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/fd8b678c7058ea864719897e9297d1/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory