.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;sentieon_haplotyper_rf)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/509fd38418f7210f0840429f91fd06/.command.log
Size: 451 bytes
Task: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;sentieon_haplotyper_rf)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/fa50c5525514d5c41697c04440a5f3/HCC1395_BL.deconflicted_germline_custom.ann_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/509fd38418f7210f0840429f91fd06/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/509fd38418f7210f0840429f91fd06/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory