#!/bin/bash -Ceuo pipefail bcftools stats \ \ \ \ \ \ \ HCC1395_tumor_vs_HCC1395_BL.strelka.somatic_indels.vcf.gz > HCC1395_tumor_vs_HCC1395_BL.strelka.somatic_indels.bcftools_stats.txt cat <<-END_VERSIONS > versions.yml "NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS": bcftools: $(bcftools --version 2>&1 | head -n1 | sed 's/^.*bcftools //; s/ .*$//') END_VERSIONS