.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_tumor_vs_HCC1395_BL;strelka)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/35efe916178082362ff52e5336bf70/.command.log
Size: 469 bytes
Task: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_tumor_vs_HCC1395_BL;strelka)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/35efe916178082362ff52e5336bf70/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/5a568abbabac8142eded503e3004b5/HCC1395_tumor_vs_HCC1395_BL.strelka.somatic_indels_custom.ann_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/35efe916178082362ff52e5336bf70/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory