succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (HCC1395_BL) 4s 1s 0s 2s 19.1 MB 2384% 13.1 MB 55.6 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (Sig_18_Blood) 4s 1s 0s 2s 19.1 MB 2446% 13.1 MB 64.8 KB 0 bytes 72.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL) 12s 3s 0s 8s 3.6 MB 103% 925.4 KB 672.0 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (Sig_18_Blood) 13s 3s 0s 9s 3.5 MB 115% 925.5 KB 672.1 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL;sentieon_haplotyper_rf) 4s 2s - - 3.3 MB 75% 149.1 KB 5.0 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (Sig_18_Blood;sentieon_haplotyper_rf) 3s 2s - - 3.3 MB 109% 151.5 KB 5.0 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL) 16s 6s 0s 9s 31.0 MB 8006% 11.5 MB 74.1 KB 280.0 KB 88.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (Sig_18_Blood) 16s 6s 0s 9s 32.5 MB 7931% 11.6 MB 82.9 KB 312.0 KB 100.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;tnseq) 41s 12s 24s 5s 6.9 GB 1220% 171.0 MB 3.3 MB 0 bytes 472.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;tnseq) 39s 11s 24s 4s 6.0 GB 1371% 171.0 MB 3.4 MB 0 bytes 536.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq) 8s 7s - - 3.3 MB 72% 480.1 KB 45.5 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;tnseq) 8s 7s - - 3.3 MB 90% 513.0 KB 51.2 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL) 5s 2s 1s 1s 383.5 MB 1110% 16.7 MB 50.3 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood) 5s 2s 1s 1s 383.6 MB 1128% 16.7 MB 57.5 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL) 16s 14s 0s 1s 21.5 MB 4316% 11.4 MB 50.4 KB 0 bytes 56.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood) 17s 14s 0s 2s 23.1 MB 4383% 11.4 MB 57.8 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (HCC1395_BL) 1m 29s 1m 26s - - 3.2 MB 96% 2.1 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (HCC1395_tumor) 1m 32s 1m 28s - - 3.2 MB 128% 2.3 MB 108.4 KB 0 bytes 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_Blood) 1m 29s 1m 26s - - 3.2 MB 135% 2.2 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_tissue) 1m 30s 1m 26s - - 3.3 MB 129% 2.6 MB 108.5 KB 0 bytes 116.0 KB 1
326 items found |