|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (HCC1395_BL)
|
4s |
1s |
0s |
2s |
19.1 MB |
2384% |
13.1 MB |
55.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (Sig_18_Blood)
|
4s |
1s |
0s |
2s |
19.1 MB |
2446% |
13.1 MB |
64.8 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL)
|
12s |
3s |
0s |
8s |
3.6 MB |
103% |
925.4 KB |
672.0 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (Sig_18_Blood)
|
13s |
3s |
0s |
9s |
3.5 MB |
115% |
925.5 KB |
672.1 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL;sentieon_haplotyper_rf)
|
4s |
2s |
- |
- |
3.3 MB |
75% |
149.1 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (Sig_18_Blood;sentieon_haplotyper_rf)
|
3s |
2s |
- |
- |
3.3 MB |
109% |
151.5 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)
|
16s |
6s |
0s |
9s |
31.0 MB |
8006% |
11.5 MB |
74.1 KB |
280.0 KB |
88.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (Sig_18_Blood)
|
16s |
6s |
0s |
9s |
32.5 MB |
7931% |
11.6 MB |
82.9 KB |
312.0 KB |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;tnseq)
|
41s |
12s |
24s |
5s |
6.9 GB |
1220% |
171.0 MB |
3.3 MB |
0 bytes |
472.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;tnseq)
|
39s |
11s |
24s |
4s |
6.0 GB |
1371% |
171.0 MB |
3.4 MB |
0 bytes |
536.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)
|
8s |
7s |
- |
- |
3.3 MB |
72% |
480.1 KB |
45.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;tnseq)
|
8s |
7s |
- |
- |
3.3 MB |
90% |
513.0 KB |
51.2 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL)
|
5s |
2s |
1s |
1s |
383.5 MB |
1110% |
16.7 MB |
50.3 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood)
|
5s |
2s |
1s |
1s |
383.6 MB |
1128% |
16.7 MB |
57.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL)
|
16s |
14s |
0s |
1s |
21.5 MB |
4316% |
11.4 MB |
50.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood)
|
17s |
14s |
0s |
2s |
23.1 MB |
4383% |
11.4 MB |
57.8 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (HCC1395_BL)
|
1m 29s |
1m 26s |
- |
- |
3.2 MB |
96% |
2.1 MB |
108.4 KB |
0 bytes |
112.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (HCC1395_tumor)
|
1m 32s |
1m 28s |
- |
- |
3.2 MB |
128% |
2.3 MB |
108.4 KB |
0 bytes |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_Blood)
|
1m 29s |
1m 26s |
- |
- |
3.2 MB |
135% |
2.2 MB |
108.4 KB |
0 bytes |
112.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_tissue)
|
1m 30s |
1m 26s |
- |
- |
3.3 MB |
129% |
2.6 MB |
108.5 KB |
0 bytes |
116.0 KB |
1 |