|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_BGZIP_TABIX (custom_Sig_18_tumor_normal)
|
5s |
3s |
0s |
1s |
3.4 MB |
104% |
288.5 KB |
11.0 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_BGZIP_TABIX (HCC1395_tumor_vs_HCC1395_BL)
|
4s |
2s |
0s |
1s |
3.4 MB |
108% |
287.1 KB |
10.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (custom_Sig_18_tumor_normal)
|
27s |
8s |
16s |
2s |
6.5 GB |
1316% |
162.6 MB |
1.7 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_CALL (HCC1395_tumor_vs_HCC1395_BL)
|
23s |
7s |
12s |
3s |
4.5 GB |
1555% |
157.8 MB |
1.7 MB |
0 bytes |
1.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (custom_Sig_18_tumor_normal)
|
5s |
2s |
1s |
1s |
202.6 MB |
980% |
44.7 MB |
84.3 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_EXPORT_VIEWER (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
3s |
1s |
1s |
207.1 MB |
1036% |
44.7 MB |
84.6 KB |
0 bytes |
96.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_BL)
|
7s |
3s |
1s |
2s |
204.9 MB |
1973% |
61.8 MB |
197.7 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (HCC1395_tumor)
|
7s |
3s |
1s |
2s |
207.5 MB |
1931% |
61.8 MB |
204.9 KB |
0 bytes |
212.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_Blood)
|
7s |
4s |
1s |
1s |
210.3 MB |
1988% |
61.8 MB |
197.2 KB |
0 bytes |
208.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_tissue)
|
6s |
2s |
1s |
2s |
207.8 MB |
1945% |
61.8 MB |
208.6 KB |
0 bytes |
216.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_BL)
|
1m 45s |
1m 42s |
0s |
2s |
10.3 MB |
105% |
162.0 MB |
2.1 MB |
0 bytes |
644.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (HCC1395_tumor)
|
1m 47s |
1m 42s |
2s |
2s |
25.6 MB |
104% |
321.0 MB |
2.2 MB |
0 bytes |
656.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_Blood)
|
1m 45s |
1m 42s |
1s |
1s |
21.4 MB |
105% |
205.2 MB |
2.2 MB |
0 bytes |
648.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_tissue)
|
1m 51s |
1m 42s |
4s |
4s |
58.2 MB |
103% |
693.9 MB |
2.2 MB |
0 bytes |
652.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
1m 48s |
48s |
54s |
5s |
2.9 GB |
413% |
697.2 MB |
854.0 MB |
0 bytes |
856.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
1m 48s |
48s |
54s |
5s |
2.9 GB |
391% |
696.8 MB |
848.9 MB |
0 bytes |
851.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal)
|
8s |
3s |
2s |
2s |
437.9 MB |
931% |
80.4 MB |
1.0 MB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
3s |
2s |
2s |
426.3 MB |
949% |
80.3 MB |
1011.6 KB |
0 bytes |
1.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal)
|
4s |
2s |
- |
- |
21.3 MB |
8074% |
262.6 KB |
46.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL)
|
6s |
4s |
- |
- |
21.2 MB |
8041% |
249.4 KB |
40.3 KB |
0 bytes |
48.0 KB |
1 |