Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/43e88fa8cb685bc4478df4108f2374/HCC1395_tumor_vs_HCC1395_BL.tnseq.filtered_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/d7c2f4a9ac5c89d2a83a27d7110e03/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/d7c2f4a9ac5c89d2a83a27d7110e03/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory