.command.err - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal)

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/e72804a78c395c6d9dacb28a35081a/.command.err
Size: 141 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal)
Attempt

Checking the headers and starting positions of 1 files
ls: custom_Sig_18_tumor_normal.snv_indel.phased.vcf.gz.csi: No such file or directory