Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/765bcc2bc000dc96d2f630cad26101/HCC1395_BL_custom.ann_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/b16166014e5a6c505e25fdce1cebe6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/b16166014e5a6c505e25fdce1cebe6/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory