#!/bin/bash -Ceuo pipefail bcftools stats \ \ \ \ \ \ \ custom_Sig_18_tumor_normal.manta.somatic_sv.vcf.gz > custom_Sig_18_tumor_normal.manta.somatic_sv.bcftools_stats.txt cat <<-END_VERSIONS > versions.yml "NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:BCFTOOLS_STATS": bcftools: $(bcftools --version 2>&1 | head -n1 | sed 's/^.*bcftools //; s/ .*$//') END_VERSIONS