|
succeeded
|
NFCORE_SAREK:SAREK:BAM_QC_SEX_ESTIMATION:BAM_ESTIMATE_SEX (Sig_18_tissue)
|
1m 42s |
1m 36s |
- |
- |
3.1 MB |
89% |
2.6 MB |
108.5 KB |
0 bytes |
116.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:SAMTOOLS_STATS (Sig_18_tissue)
|
2m 2s |
1m 36s |
17s |
9s |
9.2 MB |
129% |
694.7 MB |
132.8 KB |
0 bytes |
132.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:CRAM_QC_RECAL:MOSDEPTH (Sig_18_tissue)
|
2m 17s |
1m 35s |
33s |
9s |
1.9 GB |
123% |
719.9 MB |
14.8 MB |
381.9 MB |
14.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_PILEUP (Sig_18_tissue)
|
2m 36s |
2m 20s |
5s |
10s |
846.5 MB |
213% |
260.4 MB |
4.5 MB |
47.0 MB |
4.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_ALLELE_COUNTS (Sig_18_tissue)
|
1m 47s |
1m 39s |
4s |
3s |
69.0 MB |
216% |
742.6 MB |
42.4 MB |
0 bytes |
17.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_PROBE_COUNTS (Sig_18_tissue)
|
1m 48s |
1m 39s |
4s |
4s |
58.2 MB |
102% |
693.9 MB |
2.2 MB |
0 bytes |
652.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SOMATIC_CNV_CALLING:SOMA_CNV_NORMALIZE (Sig_18_tissue)
|
8s |
5s |
1s |
1s |
202.9 MB |
1934% |
61.8 MB |
208.6 KB |
0 bytes |
216.0 KB |
1 |