File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/9b1c73496cf900b651a7dd6ef0a900/.command.log
Size
953 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/d8f1cb21861d2654ebbd16303fba7d/Sig_18_Blood.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/d8f1cb21861d2654ebbd16303fba7d/Sig_18_Blood.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/9b1c73496cf900b651a7dd6ef0a900/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/9b1c73496cf900b651a7dd6ef0a900/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/50e7d1a6a27cbc8c668649dc6a7753/Sig_18_Blood.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/50e7d1a6a27cbc8c668649dc6a7753/Sig_18_Blood.haplotyper.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Checking the headers and starting positions of 2 files
Writing to /tmp/bcftools.YEuThG
Merging 1 temporary files
Done
Cleaning