Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/a0a0d4231945253e8e9a52d669330a/HCC1395_BL.chip.normalized.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/26ce488caec252b33ba240af129061/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/26ce488caec252b33ba240af129061/.command.run
==> STAGING COMPLETE (3 inputs)

Writing to .iQy654
Merging 1 temporary files
Cleaning
Done
ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory