.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (HCC1395_BL;sentieon_haplotyper)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/fe4d630dc5160f6859b108eb17b186/.command.log
Size: 418 bytes
Task: NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (HCC1395_BL;sentieon_haplotyper)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/04544ef0305d3dc1bb3a1ecba48670/HCC1395_BL.entropy.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/fe4d630dc5160f6859b108eb17b186/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2a/fe4d630dc5160f6859b108eb17b186/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory