/tmp/nxf.Ld58qQlAqt/nextflow-bin/merge_vcf_characteristics.py:260: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return int(variant.format('DP')[sample_idx]) /tmp/nxf.Ld58qQlAqt/nextflow-bin/merge_vcf_characteristics.py:262: DeprecationWarning: Conversion of an array with ndim > 0 to a scalar is deprecated, and will error in future. Ensure you extract a single element from your array before performing this operation. (Deprecated NumPy 1.25.) return int(variant.format('GQ')[sample_idx])