File Info

Filename
.command.out
Full Path
s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/bf/1a922eaee7b9469a19d2589952e722/.command.out
Size
2.1 KB
Task
TASTER_FREQ__2 (two.sorted.bam)
Attempt

Content

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[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
[W::sam_hrecs_update_hashes] PG line with multiple ID tags. The first encountered was preferred - ID:bwa-mem2
[mpileup] 1 samples in 1 input files
[mpileup] Combined max depth is above 1M. Potential memory hog!
Done. Merging outputs