Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/39/ea1f467fc4d9534c71b510ef7b4e5d/.command.sh
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  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/39/ea1f467fc4d9534c71b510ef7b4e5d/.command.run
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  Downloading: s3://natera-rnd-fsdx-dev-nextflow-scratch-01/work/0d/172454a98efe68e2e77feee0dba229/three.markdup.bam.bai
==> STAGING COMPLETE (5 inputs)

/usr/local/lib64/python3.11/site-packages/numpy/_core/fromnumeric.py:54: FutureWarning: 'DataFrame.swapaxes' is deprecated and will be removed in a future version. Please use 'DataFrame.transpose' instead.
  return bound(*args, **kwds)
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