Tasks
Actions
Resume
To resume this run, resubmit with same or fixed code. You can also change other parameters but that will affect caching behavior.
-resume a790a26e-a677-4215-bd59-c6a53e414020 -name harmonize_aih_dna
Error Report
Error executing process > 'NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_AIH_DNA:COPY_TMB_CSV (659_91-T1-TDNA-1_A23FG3YLT4_1_vs_659_91-N1-BDNA-1_A23FG3YLT4_1_biomarkers)'
Caused by:
Missing container image for process `NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_AIH_DNA:COPY_TMB_CSV`
Command executed:
cp 659_91-T1-TDNA-1_A23FG3YLT4_1_vs_659_91-N1-BDNA-1_A23FG3YLT4_1.tnseq.filtered_snpEff.ann.tmb.csv 659_91-T1-TDNA-1_A23FG3YLT4_1_vs_659_91-N1-BDNA-1_A23FG3YLT4_1.tmb.csv
cat <<-END_VERSIONS > versions.yml
"NFCORE_HARMONIZE:HARMONIZE:HARMONIZE_BIOMARKERS:HARMONIZE_BIOMARKERS_AIH_DNA:COPY_TMB_CSV":
copy_tmb_csv: "1.0.0"
END_VERSIONS
Command exit status:
-
Command output:
(empty)
Work dir:
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/e65d41076550a83fe114d51a75668e
Tip: when you have fixed the problem you can continue the execution adding the option `-resume` to the run command line
Workflow
- Language / Cluster
- Nextflow / pltf-dev
- Session ID
- a790a26e-a677-4215-bd59-c6a53e414020
- Source
- /code/main.nf
- Work Dir
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work
- Submitted By
- sgreer
- Resumed
- No
Cost and Runtime
- Status
- failed
- Outputs
- 3.3 GB
- Started
- Feb 24, 2026 5:43 PM
- Completed
- Feb 24, 2026 5:46 PM
- Duration
- 2m 58s
- Post-workflow Transfer
- 2m 12s
- Exit Status
- -
- Peak Tasks / CPU / Mem
- 96 / 193 / 384.0 GB