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869_XA6-T1-TDNA-1_A23WGJTLT4_1_vs_869_XA6-N1-BDNA-1_A23FG3YLT4_1.sv.hmnz.tsv
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hmnz-cgp-dna-exp0034-20260606-020246
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Jun 05, 2026 7:05 PM

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sample sv_id sv_type svtype_standard chr1 pos1 chr2 pos2 gene1 region1 strand1 gene2 region2 strand2 qual filter svlen imprecise tumor_gt tumor_pr tumor_sr mate_id
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:78765:78765:0:1:0 DELETION DEL chr1 46247394 chr1 46247541 RAD54L INTERGENIC . INTERGENIC INTERGENIC . . PASS -147 no . 233,0 1510,32
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:15926:0:0:1:0:0:0 TRANSLOCATION BND chr1 86354575 chr1 86354751 ODF2L EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 212,2 459,4 MantaBND:15926:0:0:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:15926:0:0:1:0:0:1 TRANSLOCATION BND chr1 86354746 chr1 86354580 ODF2L INTRON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 212,2 459,4 MantaBND:15926:0:0:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:16397:0:0:0:0:0:1 TRANSLOCATION BND chr1 169847528 chr1 169847661 C1orf112 INTRON:19 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 49,2 102,3 MantaBND:16397:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:16397:0:0:0:0:0:0 TRANSLOCATION BND chr1 169847656 chr1 169847533 C1orf112 INTRON:19 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 49,2 102,3 MantaBND:16397:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:70050:70050:6:0:0:0 TRANSLOCATION BND chr2 17515179 chr2 17515473 RAD51AP2 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 343,2 509,4 MantaBND:0:70050:70050:6:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:70050:70050:6:0:0:1 TRANSLOCATION BND chr2 17515468 chr2 17515184 RAD51AP2 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 343,2 509,4 MantaBND:0:70050:70050:6:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:65684:65684:2:0:0:0 TRANSLOCATION BND chr2 47375128 chr2 47375274 EPCAM INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 341,4 884,5 MantaBND:0:65684:65684:2:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:65684:65684:2:0:0:1 TRANSLOCATION BND chr2 47375264 chr2 47375138 EPCAM EXON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 341,4 884,5 MantaBND:0:65684:65684:2:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:13924:0:0:1:1:0:0 TRANSLOCATION BND chr2 69864781 chr2 69864953 GMCL1 INTRON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 140,2 308,2 MantaBND:13924:0:0:1:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:13924:0:0:1:1:0:1 TRANSLOCATION BND chr2 69864946 chr2 69864788 GMCL1 EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 140,2 308,2 MantaBND:13924:0:0:1:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:72988:72989:0:9:0:0 TRANSLOCATION BND chr2 127295925 chr2 195681104 ENSG00000286145&SLC39A10 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 759,3 1202,6 MantaBND:0:72988:72989:0:9:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73106:73106:21:0:0:0 TRANSLOCATION BND chr2 140233022 chr2 140233100 LRP1B EXON:91 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 338,0 625,9 MantaBND:0:73106:73106:21:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73106:73106:21:0:0:1 TRANSLOCATION BND chr2 140233092 chr2 140233030 LRP1B EXON:91 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 338,0 625,9 MantaBND:0:73106:73106:21:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:14401:0:0:2:5:0:1 TRANSLOCATION BND chr2 157434646 chr2 157434771 CYTIP INTRON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 125,2 276,2 MantaBND:14401:0:0:2:5:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:14401:0:0:2:5:0:0 TRANSLOCATION BND chr2 157434767 chr2 157434650 CYTIP INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 125,2 276,2 MantaBND:14401:0:0:2:5:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73524:73524:3:2:0:1 TRANSLOCATION BND chr2 167258132 chr2 167258265 XIRP2 EXON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 311,4 576,2 MantaBND:0:73524:73524:3:2:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73524:73524:3:2:0:0 TRANSLOCATION BND chr2 167258259 chr2 167258138 XIRP2 EXON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 311,4 576,2 MantaBND:0:73524:73524:3:2:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:73559:73559:0:0:0 DELETION DEL chr2 168923510 chr2 168923561 ABCB11 EXON:28 . INTERGENIC INTERGENIC . . PASS -51 no . 148,0 621,23
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73783:73783:0:0:0:0 TRANSLOCATION BND chr2 172474875 chr2 172475017 ITGA6 INTRON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 361,2 782,3 MantaBND:0:73783:73783:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73783:73783:0:0:0:1 TRANSLOCATION BND chr2 172475009 chr2 172474883 ITGA6 EXON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 361,2 782,3 MantaBND:0:73783:73783:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73899:73899:7:2:0:1 TRANSLOCATION BND chr2 177234436 chr2 177234604 NFE2L2 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 973,3 2078,4 MantaBND:0:73899:73899:7:2:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73899:73899:7:2:0:0 TRANSLOCATION BND chr2 177234596 chr2 177234444 NFE2L2 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 973,3 2078,4 MantaBND:0:73899:73899:7:2:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:72988:72989:0:9:0:1 TRANSLOCATION BND chr2 195681100 chr2 127295929 ENSG00000286145&SLC39A10 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 759,3 1202,6 MantaBND:0:72988:72989:0:9:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:65110:65110:1:0:0:1 TRANSLOCATION BND chr3 20174155 chr3 20174283 SGO1&SGO1-AS1 INTRON:6 + SGO1 INTRON:6 - . MinSomaticScore 0 yes . 189,6 . MantaBND:0:65110:65110:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:65110:65110:1:0:0:0 TRANSLOCATION BND chr3 20174283 chr3 20174155 SGO1&SGO1-AS1 GENE + SGO1 EXON:6 - . MinSomaticScore 0 yes . 189,6 . MantaBND:0:65110:65110:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:12967:1:1:1:0:0:0 TRANSLOCATION BND chr3 138733359 chr3 138733447 PIK3CB INTRON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 416,1 1012,8 MantaBND:12967:1:1:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:12967:1:1:1:0:0:1 TRANSLOCATION BND chr3 138733438 chr3 138733368 PIK3CB EXON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 416,1 1012,8 MantaBND:12967:1:1:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:13162:0:0:0:0:0:1 TRANSLOCATION BND chr3 165019778 chr3 165019945 SI INTRON:27 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 89,2 170,2 MantaBND:13162:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:13162:0:0:0:0:0:0 TRANSLOCATION BND chr3 165019934 chr3 165019789 SI INTRON:27 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 89,2 170,2 MantaBND:13162:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:61670:61670:20:0:0 DELETION DEL chr4 20253143 chr4 20253558 SLIT2 INTERGENIC . INTERGENIC INTERGENIC . . PASS -415 no . 1795,44 3368,38
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:11372:0:0:1:0:0:0 TRANSLOCATION BND chr4 81053355 chr4 81053472 BMP3 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 118,3 250,5 MantaBND:11372:0:0:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:11372:0:0:1:0:0:1 TRANSLOCATION BND chr4 81053465 chr4 81053362 BMP3 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 118,3 250,5 MantaBND:11372:0:0:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:11572:0:0:1:0:0:1 TRANSLOCATION BND chr4 105140993 chr4 105141193 INTERGENIC INTERGENIC + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 265,3 517,3 MantaBND:11572:0:0:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:11572:0:0:1:0:0:0 TRANSLOCATION BND chr4 105141186 chr4 105141000 INTERGENIC INTERGENIC + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 265,3 517,3 MantaBND:11572:0:0:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:12028:0:0:1:0:0:1 TRANSLOCATION BND chr4 176146062 chr4 176146149 WDR17 EXON:13 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 393,1 760,8 MantaBND:12028:0:0:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:12028:0:0:1:0:0:0 TRANSLOCATION BND chr4 176146144 chr4 176146067 WDR17 EXON:13 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 393,1 760,8 MantaBND:12028:0:0:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9976:0:0:4:0:0:0 TRANSLOCATION BND chr5 56865837 chr5 56865927 MAP3K1 EXON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 774,2 1610,9 MantaBND:9976:0:0:4:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9976:0:0:4:0:0:1 TRANSLOCATION BND chr5 56865923 chr5 56865841 MAP3K1 EXON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 774,2 1610,9 MantaBND:9976:0:0:4:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:60943:60943:16:1:0 DELETION DEL chr5 180603025 chr5 180603149 FLT4 EXON:30 . INTERGENIC INTERGENIC . . MinSomaticScore -124 no . 1062,0 3102,22
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8816:0:1:0:0:0:1 TRANSLOCATION BND chr6 56470239 chr6 56470337 DST EXON:96 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 108,0 242,5 MantaBND:8816:0:1:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8816:0:1:0:0:0:0 TRANSLOCATION BND chr6 56470331 chr6 56470245 DST INTRON:95 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 108,0 242,5 MantaBND:8816:0:1:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8872:0:0:3:1:0:0 TRANSLOCATION BND chr6 65335040 chr6 65335129 EYS EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 195,1 397,8 MantaBND:8872:0:0:3:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8872:0:0:3:1:0:1 TRANSLOCATION BND chr6 65335122 chr6 65335047 EYS EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 195,1 397,8 MantaBND:8872:0:0:3:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:55710:55710:21:0:0:1 TRANSLOCATION BND chr6 93260520 chr6 93260792 EPHA7 INTRON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 501,4 795,10 MantaBND:0:55710:55710:21:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:55710:55710:21:0:0:0 TRANSLOCATION BND chr6 93260784 chr6 93260528 EPHA7 INTRON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 501,4 795,10 MantaBND:0:55710:55710:21:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9173:0:0:0:0:0:1 TRANSLOCATION BND chr6 110228845 chr6 110228938 CDC40 EXON:14 + INTERGENIC INTERGENIC - . PASS 0 no . 92,1 219,8 MantaBND:9173:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9173:0:0:0:0:0:0 TRANSLOCATION BND chr6 110228935 chr6 110228848 CDC40 EXON:14 + INTERGENIC INTERGENIC - . PASS 0 no . 92,1 219,8 MantaBND:9173:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9422:0:0:0:0:0:1 TRANSLOCATION BND chr6 135411449 chr6 135411675 AHI1 EXON:21 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 268,1 474,8 MantaBND:9422:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9422:0:0:0:0:0:0 TRANSLOCATION BND chr6 135411672 chr6 135411452 AHI1 INTRON:20 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 268,1 474,8 MantaBND:9422:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9632:0:0:2:0:0:0 TRANSLOCATION BND chr6 167911155 chr6 167911280 AFDN EXON:14 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 372,3 765,3 MantaBND:9632:0:0:2:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:9632:0:0:2:0:0:1 TRANSLOCATION BND chr6 167911274 chr6 167911161 AFDN INTRON:14 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 372,3 765,3 MantaBND:9632:0:0:2:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaINS:7867:0:0:0:10:0 INSERTION INS chr7 50595602 chr7 50595602 GRB10 INTRON . INTERGENIC INTERGENIC . . MinSomaticScore 0 no . 1,0 55,45
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8014:0:0:5:0:0:1 TRANSLOCATION BND chr7 90385381 chr7 90385492 CLDN12&GTPBP10 EXON:10 + GTPBP10 EXON:10 - . MinSomaticScore 0 no . 8,1 36,2 MantaBND:8014:0:0:5:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8014:0:0:5:0:0:0 TRANSLOCATION BND chr7 90385483 chr7 90385390 CLDN12&GTPBP10 EXON:10 + GTPBP10 EXON:10 - . MinSomaticScore 0 no . 8,1 36,2 MantaBND:8014:0:0:5:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:50143:50144:0:0:0 DELETION DEL chr7 100995635 chr7 101004675 MUC12 EXON:5 . INTERGENIC INTERGENIC . . PASS -9040 yes . 964,21 .
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:50928:50928:5:0:0:1 TRANSLOCATION BND chr7 124897576 chr7 124897640 POT1 INTRON:4 + INTERGENIC INTERGENIC - . PASS 0 yes . 376,9 . MantaBND:0:50928:50928:5:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:50928:50928:5:0:0:0 TRANSLOCATION BND chr7 124897640 chr7 124897576 POT1 INTRON:4 + INTERGENIC INTERGENIC - . PASS 0 yes . 376,9 . MantaBND:0:50928:50928:5:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:89221:89221:1:3:0 DELETION DEL chr8 11758538 chr8 11758841 GATA4 EXON:7 . INTERGENIC INTERGENIC . . MinSomaticScore -303 no . 1672,38 3415,19
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:89733:89733:10:0:0:1 TRANSLOCATION BND chr8 32616456 chr8 32617349 NRG1 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 388,1 628,8 MantaBND:0:89733:89733:10:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:89733:89733:10:0:0:0 TRANSLOCATION BND chr8 32617345 chr8 32616460 NRG1 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 388,1 628,8 MantaBND:0:89733:89733:10:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:91161:91161:11:1:0 DELETION DEL chr8 55879917 chr8 55880228 LYN EXON:1 . INTERGENIC INTERGENIC . . PASS -311 no . 1577,7 2284,25
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:18326:0:0:11:0:0:0 TRANSLOCATION BND chr8 89953449 chr8 89953698 NBN EXON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 438,1 710,1 MantaBND:18326:0:0:11:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:18326:0:0:15:0:0:0 TRANSLOCATION BND chr8 89953600 chr8 89953743 NBN EXON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 336,0 592,4 MantaBND:18326:0:0:15:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:18326:0:0:11:0:0:1 TRANSLOCATION BND chr8 89953694 chr8 89953453 NBN INTRON:10 + INTERGENIC INTERGENIC - . PASS 0 no . 438,1 710,1 MantaBND:18326:0:0:11:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:18326:0:0:15:0:0:1 TRANSLOCATION BND chr8 89953739 chr8 89953604 NBN INTRON:10 + INTERGENIC INTERGENIC - . PASS 0 no . 336,0 592,4 MantaBND:18326:0:0:15:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:18455:0:0:0:0:0:1 TRANSLOCATION BND chr8 102829277 chr8 102829390 AZIN1 EXON:12 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 162,1 338,4 MantaBND:18455:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:18455:0:0:0:0:0:0 TRANSLOCATION BND chr8 102829383 chr8 102829284 AZIN1 EXON:12 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 162,1 338,4 MantaBND:18455:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:84826:84826:0:0:0:1 TRANSLOCATION BND chr9 4990498 chr9 4990632 JAK2 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 309,4 532,8 MantaBND:0:84826:84826:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:84826:84826:0:0:0:0 TRANSLOCATION BND chr9 4990626 chr9 4990504 JAK2 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 309,4 532,8 MantaBND:0:84826:84826:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17199:0:0:1:0:0:1 TRANSLOCATION BND chr9 12708003 chr9 12708194 LURAP1L-AS1&TYRP1 EXON:7 + TYRP1 EXON:7 - . MinSomaticScore 0 no . 95,2 171,3 MantaBND:17199:0:0:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17199:0:0:1:0:0:0 TRANSLOCATION BND chr9 12708187 chr9 12708010 LURAP1L-AS1&TYRP1 INTRON:7 + TYRP1 INTRON:7 - . MinSomaticScore 0 no . 95,2 171,3 MantaBND:17199:0:0:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17268:0:0:4:0:0:0 TRANSLOCATION BND chr9 20447847 chr9 20448024 MLLT3 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 161,4 213,3 MantaBND:17268:0:0:4:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17268:0:0:4:0:0:1 TRANSLOCATION BND chr9 20448016 chr9 20447855 MLLT3 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 161,4 213,3 MantaBND:17268:0:0:4:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:85317:85317:3:0:0:1 TRANSLOCATION BND chr9 21859938 chr9 21860136 ENSG00000265194&MTAP INTRON:7 + ENSG00000264545&ENSG00000265194 INTRON:4 - . MinSomaticScore 0 no . 251,1 476,6 MantaBND:0:85317:85317:3:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:85317:85317:3:0:0:0 TRANSLOCATION BND chr9 21860133 chr9 21859941 ENSG00000265194&MTAP INTRON:7 + ENSG00000264545&ENSG00000265194 INTRON:4 - . MinSomaticScore 0 no . 251,1 476,6 MantaBND:0:85317:85317:3:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17549:0:0:2:1:0:0 TRANSLOCATION BND chr9 101554570 chr9 101554754 RNF20 INTRON:14 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 99,2 173,2 MantaBND:17549:0:0:2:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17549:0:0:2:1:0:1 TRANSLOCATION BND chr9 101554746 chr9 101554578 RNF20 EXON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 99,2 173,2 MantaBND:17549:0:0:2:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:27024:87616:0:0:0 DUPLICATION DUP chr9 122724410 chr9 122750042 OR1L4&OR1L6 GENE . OR1L6 EXON:1 . . PASS 25632 yes . 1984,28 .
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:88063:88063:6:0:0 DELETION DEL chr9 127790255 chr9 127790572 CDK9 EXON:7 . MIR3960 INTERGENIC . . PASS -317 no . 2137,56 3475,58
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3317:0:0:0:0:0:0 TRANSLOCATION BND chr10 28610530 chr10 28610686 WAC INTRON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 111,2 217,6 MantaBND:3317:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3317:0:0:0:0:0:1 TRANSLOCATION BND chr10 28610680 chr10 28610536 WAC INTRON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 111,2 217,6 MantaBND:3317:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3434:0:0:3:0:0:0 TRANSLOCATION BND chr10 62069741 chr10 62069941 ARID5B EXON:8 + INTERGENIC INTERGENIC - . PASS 0 no . 196,2 403,4 MantaBND:3434:0:0:3:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3434:0:0:3:0:0:1 TRANSLOCATION BND chr10 62069933 chr10 62069749 ARID5B INTRON:8 + INTERGENIC INTERGENIC - . PASS 0 no . 196,2 403,4 MantaBND:3434:0:0:3:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3503:0:0:1:0:0:1 TRANSLOCATION BND chr10 72213043 chr10 72213219 ASCC1 INTRON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 208,2 444,3 MantaBND:3503:0:0:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3503:0:0:1:0:0:0 TRANSLOCATION BND chr10 72213212 chr10 72213050 ASCC1 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 208,2 444,3 MantaBND:3503:0:0:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3637:0:0:0:1:0:1 TRANSLOCATION BND chr10 91959856 chr10 91959932 BTAF1 EXON:10 + INTERGENIC INTERGENIC - . PASS 0 no . 119,3 244,2 MantaBND:3637:0:0:0:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3637:0:0:0:1:0:0 TRANSLOCATION BND chr10 91959928 chr10 91959860 BTAF1 INTRON:10 + INTERGENIC INTERGENIC - . PASS 0 no . 119,3 244,2 MantaBND:3637:0:0:0:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:17947:17947:3:0:0:0 TRANSLOCATION BND chr10 92608939 chr10 92609001 KIF11 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 143,3 251,3 MantaBND:0:17947:17947:3:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:17947:17947:3:0:0:1 TRANSLOCATION BND chr10 92608999 chr10 92608941 KIF11 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 143,3 251,3 MantaBND:0:17947:17947:3:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3834:0:0:17:0:0:0 TRANSLOCATION BND chr10 110590322 chr10 110590423 SMC3 INTRON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 397,1 806,8 MantaBND:3834:0:0:17:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3834:0:0:17:0:0:1 TRANSLOCATION BND chr10 110590414 chr10 110590331 SMC3 EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 397,1 806,8 MantaBND:3834:0:0:17:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3945:0:0:0:0:0:0 TRANSLOCATION BND chr10 122937702 chr10 122937832 C10orf88 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 167,1 338,8 MantaBND:3945:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3945:0:0:0:0:0:1 TRANSLOCATION BND chr10 122937824 chr10 122937710 C10orf88 EXON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 167,1 338,8 MantaBND:3945:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:10643:10643:20:0:0 DELETION DEL chr11 1096486 chr11 1099237 MUC2 INTERGENIC . INTERGENIC INTERGENIC . . PASS -2751 yes . 886,23 .
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:2745:0:0:0:0:0:0 TRANSLOCATION BND chr11 74636121 chr11 74636246 POLD3 INTRON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 165,2 365,2 MantaBND:2745:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:2745:0:0:0:0:0:1 TRANSLOCATION BND chr11 74636239 chr11 74636128 POLD3 EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 165,2 365,2 MantaBND:2745:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:8255:8255:5:0:0 DELETION DEL chr12 55971108 chr12 55971330 CDK2 EXON:7 . RAB5B INTERGENIC . . PASS -222 no . 1279,0 2566,29
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:5090:5090:3:0:0:0 TRANSLOCATION BND chr13 43106982 chr13 43107090 DNAJC15 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 42,2 64,3 MantaBND:0:5090:5090:3:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:5090:5090:3:0:0:1 TRANSLOCATION BND chr13 43107084 chr13 43106988 DNAJC15 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 42,2 64,3 MantaBND:0:5090:5090:3:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:5688:0:0:0:0:0:1 TRANSLOCATION BND chr14 21365165 chr14 21365323 SUPT16H INTRON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 126,3 280,5 MantaBND:5688:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:5688:0:0:0:0:0:0 TRANSLOCATION BND chr14 21365318 chr14 21365170 SUPT16H INTRON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 126,3 280,5 MantaBND:5688:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:29568:29568:9:4:0:0 TRANSLOCATION BND chr15 43491908 chr15 43492028 TP53BP1 INTRON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 496,3 1033,2 MantaBND:0:29568:29568:9:4:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:29568:29568:9:4:0:1 TRANSLOCATION BND chr15 43492023 chr15 43491913 TP53BP1 EXON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 496,3 1033,2 MantaBND:0:29568:29568:9:4:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:30515:30515:4:1:0:0 TRANSLOCATION BND chr15 70666834 chr15 70666960 UACA EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 414,2 838,3 MantaBND:0:30515:30515:4:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:30515:30515:4:1:0:1 TRANSLOCATION BND chr15 70666957 chr15 70666837 UACA EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 414,2 838,3 MantaBND:0:30515:30515:4:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:5670:0:0:0:0:0:1 TRANSLOCATION BND chr15 94401786 chr15 94401897 MCTP2 INTRON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 51,3 95,4 MantaBND:5670:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:5670:0:0:0:0:0:0 TRANSLOCATION BND chr15 94401888 chr15 94401795 MCTP2 INTRON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 51,3 95,4 MantaBND:5670:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:26020:26020:0:0:0:1 TRANSLOCATION BND chr16 11841895 chr16 11842021 RSL1D1 INTRON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 237,2 524,2 MantaBND:0:26020:26020:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:26020:26020:0:0:0:0 TRANSLOCATION BND chr16 11842014 chr16 11841902 RSL1D1 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 237,2 524,2 MantaBND:0:26020:26020:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:27259:27259:2:1:0:1 TRANSLOCATION BND chr16 53156272 chr16 53157795 CHD9 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 186,1 346,2 MantaBND:0:27259:27259:2:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:27259:27259:3:1:0:1 TRANSLOCATION BND chr16 53156531 chr16 53156712 CHD9 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 295,1 588,2 MantaBND:0:27259:27259:3:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:27259:27259:3:1:0:0 TRANSLOCATION BND chr16 53156704 chr16 53156539 CHD9 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 295,1 588,2 MantaBND:0:27259:27259:3:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:27259:27259:2:1:0:0 TRANSLOCATION BND chr16 53157789 chr16 53156278 CHD9 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 186,1 346,2 MantaBND:0:27259:27259:2:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:19733:19733:1:0:0:0 TRANSLOCATION BND chr17 5362791 chr17 5362913 NUP88&RABEP1 INTRON:9 + RABEP1 INTRON:9 - . MinSomaticScore 0 no . 243,3 487,2 MantaBND:0:19733:19733:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:19733:19733:1:0:0:1 TRANSLOCATION BND chr17 5362906 chr17 5362798 NUP88&RABEP1 INTRON:9 + RABEP1 INTRON:9 - . MinSomaticScore 0 no . 243,3 487,2 MantaBND:0:19733:19733:1:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:21106:21106:15:0:0:1 TRANSLOCATION BND chr17 31182506 chr17 31182596 NF1 INTRON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 310,1 655,5 MantaBND:0:21106:21106:15:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:21106:21106:15:0:0:0 TRANSLOCATION BND chr17 31182590 chr17 31182512 NF1 EXON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 310,1 655,5 MantaBND:0:21106:21106:15:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:13589:13589:6:1:0:1 TRANSLOCATION BND chr17 61845253 chr17 61845396 BRIP1 INTRON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 651,3 1301,4 MantaBND:0:13589:13589:6:1:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:13589:13589:6:1:0:0 TRANSLOCATION BND chr17 61845389 chr17 61845260 BRIP1 INTRON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 651,3 1301,4 MantaBND:0:13589:13589:6:1:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:39484:39484:2:3:0:0 TRANSLOCATION BND chr19 46312412 chr19 46312626 HIF3A INTRON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 683,2 1021,4 MantaBND:0:39484:39484:2:3:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:39484:39484:2:3:0:1 TRANSLOCATION BND chr19 46312621 chr19 46312417 HIF3A EXON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 683,2 1021,4 MantaBND:0:39484:39484:2:3:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:40122:40300:2:0:0 DUPLICATION DUP chr19 54221584 chr19 54240978 LILRA6&LILRB3 GENE . LILRA6&RPS9 GENE . . PASS 19394 yes . 720,16 .
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:44552:44552:28:3:0:1 TRANSLOCATION BND chr20 9538362 chr20 9538921 PAK5 EXON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 1044,1 1722,7 MantaBND:0:44552:44552:28:3:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:44552:44552:28:3:0:0 TRANSLOCATION BND chr20 9538915 chr20 9538368 PAK5 EXON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 1044,1 1722,7 MantaBND:0:44552:44552:28:3:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:7281:0:0:0:0:0:0 TRANSLOCATION BND chr20 38567109 chr20 38567357 RALGAPB EXON:26 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 124,2 168,3 MantaBND:7281:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:7281:0:0:0:0:0:1 TRANSLOCATION BND chr20 38567353 chr20 38567113 RALGAPB INTRON:26 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 124,2 168,3 MantaBND:7281:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:45969:45969:17:3:0 DELETION DEL chr20 58891303 chr20 58891713 ENSG00000225806 INTERGENIC . GNAS INTRON:1 . . PASS -410 no . 1154,8 1656,23
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:46218:46219:0:0:0 DELETION DEL chr20 63964591 chr20 63966294 ZNF512B EXON:6 . INTERGENIC INTERGENIC . . PASS -1703 yes . 1024,42 .
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:42180:42180:0:0:0 DELETION DEL chr22 17743798 chr22 17743865 BID EXON:3 . INTERGENIC INTERGENIC . . PASS -67 no . 203,0 791,50
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:42469:42469:37:1:0 DELETION DEL chr22 20997502 chr22 20997674 LZTR1 EXON:21 . THAP7-AS1 INTERGENIC . . PASS -172 no . 1248,0 2881,19
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:686:686:0:2:0:0 TRANSLOCATION BND chrX 21526678 chrX 21526936 CNKSR2 INTRON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 570,2 871,2 MantaBND:0:686:686:0:2:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:686:686:0:2:0:1 TRANSLOCATION BND chrX 21526930 chrX 21526684 CNKSR2 EXON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 570,2 871,2 MantaBND:0:686:686:0:2:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:149:0:0:0:0:0:1 TRANSLOCATION BND chrX 36014844 chrX 36014953 CFAP47 EXON:22 + INTERGENIC INTERGENIC - . PASS 0 no . 133,2 264,8 MantaBND:149:0:0:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:149:0:0:0:0:0:0 TRANSLOCATION BND chrX 36014949 chrX 36014848 CFAP47 INTRON:22 + INTERGENIC INTERGENIC - . PASS 0 no . 133,2 264,8 MantaBND:149:0:0:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:949:949:2:0:0:0 TRANSLOCATION BND chrX 45117813 chrX 45118050 INTERGENIC INTERGENIC + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 143,2 314,7 MantaBND:0:949:949:2:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:949:949:2:0:0:1 TRANSLOCATION BND chrX 45118045 chrX 45117818 INTERGENIC INTERGENIC + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 143,2 314,7 MantaBND:0:949:949:2:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1489:1489:23:0:0:0 TRANSLOCATION BND chrX 53191545 chrX 53191668 KDM5C GENE + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 436,2 1056,4 MantaBND:0:1489:1489:23:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1489:1489:23:0:0:1 TRANSLOCATION BND chrX 53191662 chrX 53191551 KDM5C GENE + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 436,2 1056,4 MantaBND:0:1489:1489:23:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1930:1930:4:0:0:0 TRANSLOCATION BND chrX 67623373 chrX 67623550 AR INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 279,2 532,6 MantaBND:0:1930:1930:4:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1930:1930:4:0:0:1 TRANSLOCATION BND chrX 67623543 chrX 67623380 AR INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 279,2 532,6 MantaBND:0:1930:1930:4:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:2239:2239:2:0:0 DELETION DEL chrX 71119400 chrX 71119568 MED12 EXON:2 . INTERGENIC INTERGENIC . . PASS -168 no . 869,0 1900,185
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:2473:2473:7:7:0:1 TRANSLOCATION BND chrX 77633576 chrX 77633887 ATRX EXON:18 + INTERGENIC INTERGENIC - . PASS 0 no . 402,5 792,11 MantaBND:0:2473:2473:7:7:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:2473:2473:7:7:0:0 TRANSLOCATION BND chrX 77633879 chrX 77633584 ATRX INTRON:17 + INTERGENIC INTERGENIC - . PASS 0 no . 402,5 792,11 MantaBND:0:2473:2473:7:7:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:420:0:0:8:0:0:0 TRANSLOCATION BND chrX 101883768 chrX 101883907 ZMAT1 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 272,3 544,4 MantaBND:420:0:0:8:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:420:0:0:8:0:0:1 TRANSLOCATION BND chrX 101883900 chrX 101883775 ZMAT1 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 272,3 544,4 MantaBND:420:0:0:8:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3399:3399:4:0:0:1 TRANSLOCATION BND chrX 124370335 chrX 124370537 SH2D1A&STAG2 GENE + STAG2 GENE - . MinSomaticScore 0 no . 297,2 562,3 MantaBND:0:3399:3399:4:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3399:3399:4:0:0:0 TRANSLOCATION BND chrX 124370528 chrX 124370344 SH2D1A&STAG2 GENE + STAG2 GENE - . MinSomaticScore 0 no . 297,2 562,3 MantaBND:0:3399:3399:4:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3950:3951:0:0:0:0 TRANSLOCATION BND chrX 152700858 chrX 152767302 MAGEA3&MAGEA6 EXON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 yes . 1036,6 . MantaBND:0:3950:3951:0:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3950:3951:1:0:0:0 TRANSLOCATION BND chrX 152701121 chrX 152767499 MAGEA3&MAGEA6 EXON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 yes . 1131,4 . MantaBND:0:3950:3951:1:0:0:1
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3950:3951:0:0:0:1 TRANSLOCATION BND chrX 152767302 chrX 152700858 MAGEA3&MAGEA6 EXON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 yes . 1036,6 . MantaBND:0:3950:3951:0:0:0:0
869_XA6-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3950:3951:1:0:0:1 TRANSLOCATION BND chrX 152767499 chrX 152701121 MAGEA3&MAGEA6 EXON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 yes . 1131,4 . MantaBND:0:3950:3951:1:0:0:0
153 rows