File Info

Filename
1136_7L-T1-TDNA-1_A23WGJTLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/1136_7L-T1-TDNA-1_A23WGJTLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1/variants/dna_fusions/1136_7L-T1-TDNA-1_A23WGJTLT4_1_vs_1136_7L-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
Size
72.1 KB
Workflow Run
hmnz-cgp-dna-exp0034-20260606-020246
Published
Jun 05, 2026 7:05 PM

Content

View in new tab
sample sv_id sv_type svtype_standard chr1 pos1 chr2 pos2 gene1 region1 strand1 gene2 region2 strand2 qual filter svlen imprecise tumor_gt tumor_pr tumor_sr mate_id
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:72190:72190:0:1:0 DELETION DEL chr1 2563225 chr1 2563404 TNFRSF14 EXON:8 . ENSG00000225931 INTERGENIC . . PASS -179 no . 178,0 836,18
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73337:73338:0:0:0:0 TRANSLOCATION BND chr1 28532029 chr5 179766365 MAML1&RCC1 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 101,1 396,8 MantaBND:0:73337:73338:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:70797:0:2:1:0:0 DUPLICATION DUP chr1 52886969 chr1 52887086 ZYG11A EXON:11 . INTERGENIC INTERGENIC . . PASS 117 no . 21,4 87,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:74284:74284:1:0:0:0 TRANSLOCATION BND chr1 54619946 chr1 54620094 ACOT11&FAM151A INTRON:15 + ACOT11 INTRON:15 - . MinSomaticScore 0 no . 56,1 409,8 MantaBND:0:74284:74284:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:74284:74284:1:0:0:1 TRANSLOCATION BND chr1 54620087 chr1 54619953 ACOT11&FAM151A INTRON:15 + ACOT11 INTRON:15 - . MinSomaticScore 0 no . 56,1 409,8 MantaBND:0:74284:74284:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:74457:74457:6:0:0 DUPLICATION DUP chr1 64178127 chr1 64178382 ROR1 EXON:8 . INTERGENIC INTERGENIC . . PASS 255 no . 23,4 145,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:71360:0:1:1:0:0 DUPLICATION DUP chr1 74041250 chr1 74041536 LRRIQ3 EXON:7 . INTERGENIC INTERGENIC . . MinSomaticScore 286 no . 29,2 154,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:74865:74865:0:0:0:0 TRANSLOCATION BND chr1 88741003 chr1 88741112 PKN2 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 39,1 175,6 MantaBND:0:74865:74865:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:74865:74865:0:0:0:1 TRANSLOCATION BND chr1 88741108 chr1 88741007 PKN2 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 39,1 175,6 MantaBND:0:74865:74865:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:71862:0:0:0:0:0:1 TRANSLOCATION BND chr1 93575881 chr1 93576103 BCAR3 INTRON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 30,1 179,6 MantaBND:71862:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:71862:0:0:0:0:0:0 TRANSLOCATION BND chr1 93576101 chr1 93575883 BCAR3 EXON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 30,1 179,6 MantaBND:71862:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77364:77367:0:0:0:1 TRANSLOCATION BND chr1 99689689 chr1 179917548 PALMD&TOR1AIP1 EXON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 34,1 152,6 MantaBND:0:77364:77367:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77212:77214:0:4:0:0 TRANSLOCATION BND chr1 162782505 chr1 162783394 DDR2 EXON:18 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 159,6 MantaBND:0:77212:77214:0:4:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77212:77214:1:3:0:0 TRANSLOCATION BND chr1 162782663 chr1 162783498 DDR2 EXON:18 + INTERGENIC INTERGENIC - . PASS 0 no . 41,1 179,2 MantaBND:0:77212:77214:1:3:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77212:77214:0:4:0:1 TRANSLOCATION BND chr1 162783391 chr1 162782508 DDR2 EXON:18 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 159,6 MantaBND:0:77212:77214:0:4:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77212:77214:1:3:0:1 TRANSLOCATION BND chr1 162783494 chr1 162782667 DDR2 EXON:18 + INTERGENIC INTERGENIC - . PASS 0 no . 41,1 179,2 MantaBND:0:77212:77214:1:3:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:73933:0:0:0:0:0:1 TRANSLOCATION BND chr1 166939466 chr1 166939614 ILDR2 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 16,1 57,3 MantaBND:73933:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:73933:0:0:0:0:0:0 TRANSLOCATION BND chr1 166939605 chr1 166939475 ILDR2 INTRON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 16,1 57,3 MantaBND:73933:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77364:77367:0:0:0:0 TRANSLOCATION BND chr1 179917542 chr1 99689695 PALMD&TOR1AIP1 EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 34,1 152,6 MantaBND:0:77364:77367:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:75008:75008:1:0:0:0 TRANSLOCATION BND chr1 196994008 chr1 196994136 CFHR5 INTRON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 11,1 64,8 MantaBND:0:75008:75008:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:75008:75008:1:0:0:1 TRANSLOCATION BND chr1 196994131 chr1 196994013 CFHR5 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 11,1 64,8 MantaBND:0:75008:75008:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77804:77804:1:0:0:1 TRANSLOCATION BND chr1 197328417 chr1 197328484 CRB1 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 25,0 118,5 MantaBND:0:77804:77804:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:77804:77804:1:0:0:0 TRANSLOCATION BND chr1 197328478 chr1 197328423 CRB1 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 25,0 118,5 MantaBND:0:77804:77804:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:75647:1:2:0:0:0 DUPLICATION DUP chr1 212100887 chr1 212101098 RN7SKP98 INTERGENIC . DTL EXON:13 . . PASS 211 no . 40,4 166,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:76039:0:0:0:0:0:0 TRANSLOCATION BND chr1 225380232 chr1 225380309 DNAH14 EXON:80 + INTERGENIC INTERGENIC - . PASS 0 no . 23,1 99,8 MantaBND:76039:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:76039:0:0:0:0:0:1 TRANSLOCATION BND chr1 225380302 chr1 225380239 DNAH14 EXON:80 + INTERGENIC INTERGENIC - . PASS 0 no . 23,1 99,8 MantaBND:76039:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:76808:1:2:0:0:0:1 TRANSLOCATION BND chr1 246877093 chr1 246877347 AHCTF1 INTRON:22 + INTERGENIC INTERGENIC - . PASS 0 no . 9,1 58,6 MantaBND:76808:1:2:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:76808:1:2:0:0:0:0 TRANSLOCATION BND chr1 246877341 chr1 246877099 AHCTF1 INTRON:21 + INTERGENIC INTERGENIC - . PASS 0 no . 9,1 58,6 MantaBND:76808:1:2:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:62710:0:2:1:0:0 DUPLICATION DUP chr2 47812962 chr2 47813845 FBXO11 EXON:17 . INTERGENIC INTERGENIC . . PASS 883 no . 39,2 186,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:67049:67056:0:0:0 DELETION DEL chr2 60923279 chr2 60925343 REL EXON:11 . ENSG00000267520 INTERGENIC . . PASS -2064 no . 32,0 199,11
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:67223:67223:3:2:0 DUPLICATION DUP chr2 61498704 chr2 61498930 XPO1 INTRON:8 . INTERGENIC INTERGENIC . . PASS 226 no . 50,3 220,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:63085:0:0:0:1:0:0 TRANSLOCATION BND chr2 62990690 chr2 62990839 EHBP1&ENSG00000231609 INTRON:17 + EHBP1 INTRON:17 - . PASS 0 no . 14,1 87,8 MantaBND:63085:0:0:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:63085:0:0:0:1:0:1 TRANSLOCATION BND chr2 62990833 chr2 62990696 EHBP1&ENSG00000231609 EXON:18 + EHBP1 EXON:18 - . PASS 0 no . 14,1 87,8 MantaBND:63085:0:0:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:67501:67502:0:1:0 DUPLICATION DUP chr2 73815321 chr2 73815613 C2orf78 EXON:2 . INTERGENIC INTERGENIC . . MinSomaticScore 292 no . 18,2 82,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaINS:64209:0:0:0:6:0 INSERTION INS chr2 108767666 chr2 108767691 RANBP2 GENE . INTERGENIC INTERGENIC . . PASS 0 no . 16,0 142,7
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:64962:0:1:1:1:0:0 TRANSLOCATION BND chr2 151462410 chr2 151462558 RIF1 INTRON:27 + INTERGENIC INTERGENIC - . PASS 0 no . 23,0 97,5 MantaBND:64962:0:1:1:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:64962:0:1:0:0:0:0 TRANSLOCATION BND chr2 151462418 chr2 151462549 RIF1 EXON:28 + INTERGENIC INTERGENIC - . PASS 0 no . 16,2 95,4 MantaBND:64962:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:64962:0:1:0:0:0:1 TRANSLOCATION BND chr2 151462544 chr2 151462423 RIF1 INTRON:28 + INTERGENIC INTERGENIC - . PASS 0 no . 16,2 95,4 MantaBND:64962:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:64962:0:1:1:1:0:1 TRANSLOCATION BND chr2 151462552 chr2 151462416 RIF1 INTRON:28 + INTERGENIC INTERGENIC - . PASS 0 no . 23,0 97,5 MantaBND:64962:0:1:1:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:69234:69234:2:0:0:0 TRANSLOCATION BND chr2 164695009 chr2 164695207 COBLL1 EXON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 35,1 154,5 MantaBND:0:69234:69234:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:69234:69234:2:0:0:1 TRANSLOCATION BND chr2 164695201 chr2 164695015 COBLL1 EXON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 35,1 154,5 MantaBND:0:69234:69234:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:65745:0:1:1:1:0:1 TRANSLOCATION BND chr2 173955514 chr2 173955798 SP3 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 19,1 114,8 MantaBND:65745:0:1:1:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:65745:0:1:1:1:0:0 TRANSLOCATION BND chr2 173955794 chr2 173955518 SP3 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 19,1 114,8 MantaBND:65745:0:1:1:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:69631:69632:0:3:0:1 TRANSLOCATION BND chr2 177219227 chr2 177219337 HNRNPA3 INTRON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 21,2 201,2 MantaBND:0:69631:69632:0:3:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:69631:69632:0:3:0:0 TRANSLOCATION BND chr2 177219337 chr2 177219227 HNRNPA3 INTRON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 21,2 201,2 MantaBND:0:69631:69632:0:3:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:69912:69912:1:0:0:0 TRANSLOCATION BND chr2 178593246 chr2 178593415 TTN&TTN-AS1 EXON:299 + TTN EXON:299 - . PASS 0 no . 18,0 113,7 MantaBND:0:69912:69912:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:69912:69912:1:0:0:1 TRANSLOCATION BND chr2 178593411 chr2 178593250 TTN&TTN-AS1 EXON:299 + TTN EXON:299 - . PASS 0 no . 18,0 113,7 MantaBND:0:69912:69912:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:70076:70076:3:0:0:0 TRANSLOCATION BND chr2 178725788 chr2 178725879 TTN&TTN-AS1 EXON:70 + ENSG00000267784&TTN EXON:70 - . MinSomaticScore 0 no . 16,1 88,6 MantaBND:0:70076:70076:3:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:70076:70076:3:0:0:1 TRANSLOCATION BND chr2 178725869 chr2 178725798 TTN&TTN-AS1 EXON:70 + ENSG00000267784&TTN EXON:70 - . MinSomaticScore 0 no . 16,1 88,6 MantaBND:0:70076:70076:3:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:70415:70416:0:0:0 DUPLICATION DUP chr2 189805723 chr2 189806178 PMS1 GENE . INTERGENIC INTERGENIC . . MinSomaticScore 455 yes . 40,5 .
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:70825:70825:3:0:0:1 TRANSLOCATION BND chr2 208248430 chr2 208248539 IDH1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 20,1 171,8 MantaBND:0:70825:70825:3:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:70825:70825:3:0:0:0 TRANSLOCATION BND chr2 208248536 chr2 208248433 IDH1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 20,1 171,8 MantaBND:0:70825:70825:3:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:55764:0:0:1:0:0:1 TRANSLOCATION BND chr3 9371213 chr3 9371353 THUMPD3&THUMPD3-AS1 EXON:4 + THUMPD3 EXON:4 - . MinSomaticScore 0 no . 33,1 162,6 MantaBND:55764:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:55764:0:0:1:0:0:0 TRANSLOCATION BND chr3 9371348 chr3 9371218 THUMPD3&THUMPD3-AS1 EXON:4 + THUMPD3 EXON:4 - . MinSomaticScore 0 no . 33,1 162,6 MantaBND:55764:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:59717:59717:3:1:0:1 TRANSLOCATION BND chr3 10151282 chr3 10151372 ENSG00000287086&VHL EXON:3 + VHL EXON:3 - . PASS 0 no . 42,2 203,2 MantaBND:0:59717:59717:3:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:59717:59717:3:1:0:0 TRANSLOCATION BND chr3 10151368 chr3 10151286 ENSG00000287086&VHL EXON:3 + VHL EXON:3 - . PASS 0 no . 42,2 203,2 MantaBND:0:59717:59717:3:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:60265:60265:1:0:0:1 TRANSLOCATION BND chr3 12381326 chr3 12381458 PPARG EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 23,1 183,8 MantaBND:0:60265:60265:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:60265:60265:1:0:0:0 TRANSLOCATION BND chr3 12381454 chr3 12381330 PPARG EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 23,1 183,8 MantaBND:0:60265:60265:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:56481:0:0:0:0:0:0 TRANSLOCATION BND chr3 37355067 chr3 37355151 GOLGA4 INTRON:21 + INTERGENIC INTERGENIC - . PASS 0 no . 15,1 84,8 MantaBND:56481:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:56481:0:0:0:0:0:1 TRANSLOCATION BND chr3 37355146 chr3 37355072 GOLGA4 EXON:22 + INTERGENIC INTERGENIC - . PASS 0 no . 15,1 84,8 MantaBND:56481:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:56744:1:1:0:0:0:0 TRANSLOCATION BND chr3 44805085 chr3 44805206 KIF15 EXON:15 + INTERGENIC INTERGENIC - . PASS 0 no . 14,2 84,4 MantaBND:56744:1:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:56744:1:1:0:0:0:1 TRANSLOCATION BND chr3 44805205 chr3 44805086 KIF15 INTRON:15 + INTERGENIC INTERGENIC - . PASS 0 no . 14,2 84,4 MantaBND:56744:1:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:20614:2:3:0:1:0 DELETION DEL chr3 51971684 chr3 65439928 PCBP4 GENE . ABHD14A&ABHD14A-ACY1&ABHD14B&ABHD6&ACOX2&ACTR8&ACY1&ADAMTS9&ADAMTS9-AS1&ADAMTS9-AS2&ALAS1&ALDOAP1&APPL1&ARF4&ARF4-AS1&ARHGEF3&ARHGEF3-AS1&ASB14&ATXN7&BAP1&C3orf14&C3orf49&CABYRP1&CACNA1D&CACNA2D3&CACNA2D3-AS1&CADPS&CCDC66&CFAP20DC&CFAP20DC-AS1&CHDH&DCP1A&DENND6A&DENND6A-AS1&DENND6A-DT&DNAH1&DNAH12&DNASE1L3&DUSP7&ENSG00000173366&ENSG00000212608&ENSG00000224479&ENSG00000225662&ENSG00000225673&ENSG00000226082&ENSG00000227224&ENSG00000229863&ENSG00000236722&ENSG00000237186&ENSG00000239991&ENSG00000240097&ENSG00000240777&ENSG00000241804&ENSG00000242317&ENSG00000242545&ENSG00000242568&ENSG00000242775&ENSG00000243224&ENSG00000243295&ENSG00000243384&ENSG00000243696&ENSG00000243903&ENSG00000252787&ENSG00000270059&ENSG00000270941&ENSG00000271137&ENSG00000271843&ENSG00000271916&ENSG00000271976&ENSG00000272181&ENSG00000272182&ENSG00000272202&ENSG00000272305&ENSG00000272360&ENSG00000272762&ENSG00000273493&ENSG00000275607&ENSG00000275956&ENSG00000279144&ENSG00000280003&ENSG00000280417&ENSG00000280904&ENSG00000283148&ENSG00000283511&ENSG00000285685&ENSG00000286353&ENSG00000286419&ENSG00000286531&ENSG00000286952&ENSG00000287502&ENSG00000287649&ENSG00000288029&ENSG00000289063&ENSG00000289519&ERC2&ERC2-IT1&ESRG&FAM107A&FAM3D&FAM3D-AS1&FEZF2&FHIT&FLNB&FLNB-AS1&GLT8D1&GLYCTK&GLYCTK-AS1&GNL3&HESX1&HTD2&ID2B&IL17RB&IL17RD&ITIH1&ITIH3&ITIH4&ITIH4-AS1&KCTD6&KRT8P35&LINC00698&LINC00994&LINC02017&LINC02030&LINC02040&LRTM1&MAGI1&MIR135A1&MIR3938&MIR548BB&MIR8064&MIRLET7G&MUSTN1&Metazoa_SRP&NEK4&NISCH&NT5DC2&PBRM1&PCBP4&PDE12&PDHA1P1&PDHB&PHF7&POC1A&PPIAP16&PPIAP70&PPIAP71&PPM1M&PPP2R5CP&PRDX3P4&PRICKLE2&PRICKLE2-AS1&PRICKLE2-AS1&PRICKLE2-AS2&PRICKLE2-AS3&PRICKLE2-DT&PRKCD&PSMD6&PSMD6-AS1&PSMD6-AS2&PTPRG&PTPRG-AS1&PXK&RFT1&RN7SKP45&RN7SL863P&RNA5SP133&RNA5SP134&RNF7P1&RNU2-10P&RNU6-108P&RNU6-1181P&RNU6-139P&RNU6-483P&RNU6-739P&RNU6-856P&RNU6ATAC16P&RNU6ATAC26P&RPL10AP6&RPL29&RPP14&RPS15P5&SCAANT1&SELENOK&SEMA3G&SERBP1P3&SFMBT1&SLMAP&SMIM4&SNORD19&SNORD19B&SNORD19C&SNORD38C&SNORD63&SNORD69&SNTN&SPATA12&SPCS1&STAB1&STIMATE&STIMATE-MUSTN1&SYNPR&SYNPR-AS1&TASOR&THOC7&THOC7-AS1&TKT&TLR9&TNNC1&TWF2&U3&U3&UBL5P3&WDR82&WNT5A&WNT5A-AS1&Y_RNA&Y_RNA&Y_RNA GENE . . MinSomaticScore -13468244 no . 147,1 686,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:62337:62337:2:1:0:1 TRANSLOCATION BND chr3 86978441 chr3 86978549 VGLL3 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 18,2 77,3 MantaBND:0:62337:62337:2:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:62337:62337:2:1:0:0 TRANSLOCATION BND chr3 86978544 chr3 86978446 VGLL3 EXON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 18,2 77,3 MantaBND:0:62337:62337:2:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:59091:0:1:0:0:0 DUPLICATION DUP chr3 127677474 chr3 127677900 PODXL2 INTERGENIC . ABTB1 GENE . . PASS 426 no . 80,3 350,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:59196:0:0:0:0:0:0 TRANSLOCATION BND chr3 130426203 chr3 130426299 COL6A5 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 38,2 195,5 MantaBND:59196:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:59196:0:0:0:0:0:1 TRANSLOCATION BND chr3 130426296 chr3 130426206 COL6A5 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 38,2 195,5 MantaBND:59196:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:63191:63191:3:0:0 DUPLICATION DUP chr3 130566863 chr3 130567152 COL6A6 GENE . INTERGENIC INTERGENIC . . MinSomaticScore 289 no . 40,2 194,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:63355:63355:0:0:0:0 TRANSLOCATION BND chr3 136623257 chr3 136623521 STAG1 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 9,0 41,10 MantaBND:0:63355:63355:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:63355:63355:0:0:0:1 TRANSLOCATION BND chr3 136623513 chr3 136623265 STAG1 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 9,0 41,10 MantaBND:0:63355:63355:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:60092:1:4:0:0:0:1 TRANSLOCATION BND chr3 157364383 chr3 157364546 ENSG00000243176&VEPH1 EXON:8 + VEPH1 EXON:8 - . PASS 0 no . 23,2 116,4 MantaBND:60092:1:4:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:60092:1:4:0:0:0:0 TRANSLOCATION BND chr3 157364539 chr3 157364390 ENSG00000243176&VEPH1 INTRON:7 + VEPH1 INTRON:7 - . PASS 0 no . 23,2 116,4 MantaBND:60092:1:4:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:60234:1:1:2:0:0 DELETION DEL chr3 165829883 chr3 165830008 BCHE EXON:2 . LINC01322 GENE . . MinSomaticScore -125 no . 19,0 119,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:57046:57047:1:0:0:0 TRANSLOCATION BND chr4 1979514 chr4 1980070 NSD2 EXON:22 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 91,2 494,4 MantaBND:0:57046:57047:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:57046:57047:1:0:0:1 TRANSLOCATION BND chr4 1980064 chr4 1979520 NSD2 EXON:22 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 91,2 494,4 MantaBND:0:57046:57047:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:51966:0:1:0:0:0:1 TRANSLOCATION BND chr4 2304362 chr4 2304659 ENSG00000251148&ZFYVE28 EXON:8 + ZFYVE28 EXON:8 - . PASS 0 no . 71,1 386,8 MantaBND:51966:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:51966:0:1:0:0:0:0 TRANSLOCATION BND chr4 2304655 chr4 2304366 ENSG00000251148&ZFYVE28 EXON:8 + ZFYVE28 EXON:8 - . PASS 0 no . 71,1 386,8 MantaBND:51966:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:52081:0:0:0:0:0:1 TRANSLOCATION BND chr4 5416868 chr4 5417006 STK32B EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 143,8 MantaBND:52081:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:52081:0:0:0:0:0:0 TRANSLOCATION BND chr4 5417002 chr4 5416872 STK32B INTRON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 143,8 MantaBND:52081:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:57315:57318:0:2:0 DUPLICATION DUP chr4 20619821 chr4 20620295 SLIT2 INTERGENIC . INTERGENIC INTERGENIC . . PASS 474 no . 45,5 165,10
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:52752:0:0:2:0:0:0 TRANSLOCATION BND chr4 46964992 chr4 46965257 GABRA4 EXON:8 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 21,1 102,6 MantaBND:52752:0:0:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:52752:0:0:2:0:0:1 TRANSLOCATION BND chr4 46965255 chr4 46964994 GABRA4 INTRON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 21,1 102,6 MantaBND:52752:0:0:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:57570:57572:0:1:0:1 TRANSLOCATION BND chr4 49003783 chr8 38272484 CWH43&NSD3 EXON:7 + CWH43&DDHD2 EXON:7 - . MinSomaticScore 0 no . 147,1 556,8 MantaBND:0:57570:57572:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:57769:57769:0:1:0 DELETION DEL chr4 54729279 chr4 54729352 KIT INTRON:14 . INTERGENIC INTERGENIC . . PASS -73 no . 31,0 170,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:53011:0:0:0:0:0:0 TRANSLOCATION BND chr4 55435568 chr4 55435691 CLOCK&TMEM165 GENE + TMEM165 GENE - . PASS 0 no . 28,1 141,8 MantaBND:53011:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:53011:0:0:0:0:0:1 TRANSLOCATION BND chr4 55435686 chr4 55435573 CLOCK&TMEM165 GENE + TMEM165 GENE - . PASS 0 no . 28,1 141,8 MantaBND:53011:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:53427:1:2:0:0:0:1 TRANSLOCATION BND chr4 75957581 chr4 75957714 SDAD1 EXON:19 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 31,2 252,4 MantaBND:53427:1:2:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:53427:1:2:0:0:0:0 TRANSLOCATION BND chr4 75957708 chr4 75957587 SDAD1 EXON:19 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 31,2 252,4 MantaBND:53427:1:2:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:53460:0:0:1:0:0:0 TRANSLOCATION BND chr4 76195757 chr4 76195887 ENSG00000286074&SCARB2 EXON:2 + SCARB2 EXON:2 - . PASS 0 no . 21,2 97,6 MantaBND:53460:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:53460:0:0:1:0:0:1 TRANSLOCATION BND chr4 76195880 chr4 76195764 ENSG00000286074&SCARB2 INTRON:1 + SCARB2 INTRON:1 - . PASS 0 no . 21,2 97,6 MantaBND:53460:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:58238:58240:1:2:0 DUPLICATION DUP chr4 76739352 chr4 76739695 SHROOM3 EXON:3 . SHROOM3-AS1 EXON:2 . . MinSomaticScore 343 no . 67,2 382,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:58374:58374:0:1:0 DELETION DEL chr4 86000508 chr4 86000614 ARHGAP24 EXON:10 . MAPK10 EXON:15 . . PASS -106 no . 38,0 197,5
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:58654:58655:2:0:0 DUPLICATION DUP chr4 105276184 chr4 105276520 TET2 EXON:10 . INTERGENIC INTERGENIC . . MinSomaticScore 336 no . 54,2 249,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:48164:0:1:0:0:0 DELETION DEL chr5 32390470 chr5 36116579 ZFR GENE . ADAMTS12&AGXT2&AMACR&BRIX1&C1QTNF3&C1QTNF3-AMACR&CAPSL&DNAJC21&ENSG00000215156&ENSG00000215158&ENSG00000240376&ENSG00000248349&ENSG00000248969&ENSG00000249102&ENSG00000249142&ENSG00000249380&ENSG00000249748&ENSG00000250140&ENSG00000250234&ENSG00000250583&ENSG00000250672&ENSG00000250697&ENSG00000250767&ENSG00000250886&ENSG00000250914&ENSG00000251062&ENSG00000251281&ENSG00000251591&ENSG00000271771&ENSG00000271874&ENSG00000278900&ENSG00000279737&ENSG00000279995&ENSG00000286543&ENSG00000286741&ENSG00000288579&IL7R&LINC02061&LINC02120&LINC02160&LMBRD2&MIR579&NPR3&PRLR&RAD1&RAI14&RNU6-923P&RNU7-130P&RPL21P54&RXFP3&SLC45A2&SPEF2&SUB1&TARS1&TARS1-DT&TOMM40P3&TTC23L&TTC23L-AS1&U3&UGT3A1&UGT3A2&ZFR GENE . . MinSomaticScore -3726109 no . 21,0 121,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:53992:53992:1:0:0:0 TRANSLOCATION BND chr5 36995610 chr5 36995745 NIPBL INTRON:10 + INTERGENIC INTERGENIC - . PASS 0 no . 26,2 129,3 MantaBND:0:53992:53992:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:53992:53992:1:0:0:1 TRANSLOCATION BND chr5 36995736 chr5 36995619 NIPBL EXON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 26,2 129,3 MantaBND:0:53992:53992:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:49380:0:1:0:0:0:1 TRANSLOCATION BND chr5 80666316 chr5 80666390 MSH3 INTRON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 14,0 84,4 MantaBND:49380:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:49380:0:1:0:0:0:0 TRANSLOCATION BND chr5 80666385 chr5 80666321 MSH3 INTRON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 14,0 84,4 MantaBND:49380:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:49896:0:0:0:0:0:1 TRANSLOCATION BND chr5 112976891 chr5 112976995 DCP2 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 83,1 374,8 MantaBND:49896:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:49896:0:0:0:0:0:0 TRANSLOCATION BND chr5 112976989 chr5 112976897 DCP2 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 83,1 374,8 MantaBND:49896:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:49952:0:0:4:0:0:0 TRANSLOCATION BND chr5 115271503 chr5 115271685 CCDC112 EXON:7 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 136,8 MantaBND:49952:0:0:4:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:49952:0:0:4:0:0:1 TRANSLOCATION BND chr5 115271680 chr5 115271508 CCDC112 INTRON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 136,8 MantaBND:49952:0:0:4:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:50121:0:1:0:0:0:1 TRANSLOCATION BND chr5 126636086 chr5 126636212 TEX43 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 27,2 123,4 MantaBND:50121:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:50121:0:1:0:0:0:0 TRANSLOCATION BND chr5 126636202 chr5 126636096 TEX43 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 27,2 123,4 MantaBND:50121:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:50827:0:1:0:0:0 DELETION DEL chr5 144162483 chr5 144164121 YIPF5 EXON:4 . INTERGENIC INTERGENIC . . PASS -1638 no . 14,2 70,2
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:55969:55969:6:0:0:0 TRANSLOCATION BND chr5 149505039 chr5 149505099 CSNK1A1 INTRON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 27,0 165,4 MantaBND:0:55969:55969:6:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:55969:55969:6:0:0:1 TRANSLOCATION BND chr5 149505093 chr5 149505045 CSNK1A1 INTRON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 27,0 165,4 MantaBND:0:55969:55969:6:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:73337:73338:0:0:0:1 TRANSLOCATION BND chr5 179766362 chr1 28532032 MAML1&RCC1 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 101,1 396,8 MantaBND:0:73337:73338:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:48750:48794:0:0:0:0 TRANSLOCATION BND chr6 7585684 chr19 58500396 DSP&SLC27A5 EXON:24 - INTERGENIC INTERGENIC + . MinSomaticScore 0 no . 104,2 558,2 MantaBND:0:48750:48794:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:49272:49272:19:2:0:0 TRANSLOCATION BND chr6 29728620 chr6 29728801 HLA-F&HLA-F-AS1 GENE + HLA-F GENE - . PASS 0 no . 43,1 257,8 MantaBND:0:49272:49272:19:2:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:49272:49272:19:2:0:1 TRANSLOCATION BND chr6 29728796 chr6 29728625 HLA-F&HLA-F-AS1 GENE + HLA-F GENE - . PASS 0 no . 43,1 257,8 MantaBND:0:49272:49272:19:2:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:49398:49398:6:4:0:1 TRANSLOCATION BND chr6 29945462 chr6 29945548 HLA-A EXON:8 + INTERGENIC INTERGENIC - . PASS 0 no . 41,0 332,6 MantaBND:0:49398:49398:6:4:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:49398:49398:6:4:0:0 TRANSLOCATION BND chr6 29945542 chr6 29945468 HLA-A EXON:8 + INTERGENIC INTERGENIC - . PASS 0 no . 41,0 332,6 MantaBND:0:49398:49398:6:4:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:43934:0:0:0:0:0:1 TRANSLOCATION BND chr6 30578556 chr6 30578669 ABCF1 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 17,2 119,6 MantaBND:43934:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:43934:0:0:0:0:0:0 TRANSLOCATION BND chr6 30578662 chr6 30578563 ABCF1 INTRON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 17,2 119,6 MantaBND:43934:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:49503:49503:3:1:0:0 TRANSLOCATION BND chr6 30647765 chr6 30648039 C6orf136 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 21,1 231,6 MantaBND:0:49503:49503:3:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:49503:49503:3:1:0:1 TRANSLOCATION BND chr6 30648028 chr6 30647776 C6orf136 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 21,1 231,6 MantaBND:0:49503:49503:3:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:45228:2:3:0:0:0:1 TRANSLOCATION BND chr6 54941218 chr6 54941448 FAM83B EXON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 12,2 120,4 MantaBND:45228:2:3:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:45228:2:3:0:0:0:0 TRANSLOCATION BND chr6 54941443 chr6 54941223 FAM83B EXON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 12,2 120,4 MantaBND:45228:2:3:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:51113:51114:0:1:0 DUPLICATION DUP chr6 56616570 chr6 56617401 DST INTRON:36 . INTERGENIC INTERGENIC . . MinSomaticScore 831 no . 20,1 86,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:45609:0:0:1:0:0:1 TRANSLOCATION BND chr6 78966084 chr6 78966164 PHIP INTRON:27 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 4,1 18,6 MantaBND:45609:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:45609:0:0:1:0:0:0 TRANSLOCATION BND chr6 78966155 chr6 78966093 PHIP INTRON:27 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 4,1 18,6 MantaBND:45609:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:45733:0:1:0:1:0:1 TRANSLOCATION BND chr6 84174908 chr6 85574288 CEP162&ENSG00000271793 EXON:15 + CEP162&SNX14 EXON:15 - . MinSomaticScore 0 no . 29,1 139,6 MantaBND:45733:0:1:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:45733:0:1:0:1:0:0 TRANSLOCATION BND chr6 85574285 chr6 84174911 CEP162&ENSG00000271793 EXON:13 + CEP162&SNX14 EXON:2 - . MinSomaticScore 0 no . 29,1 139,6 MantaBND:45733:0:1:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:51957:51995:0:1:0 DUPLICATION DUP chr6 117325233 chr6 117326395 ROS1 EXON:33 . ENSG00000282218 INTRON:4 . . MinSomaticScore 1162 no . 40,1 221,5
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaINS:0:52038:52038:0:10:0 INSERTION INS chr6 117335453 chr6 117335453 ROS1 INTRON . INTERGENIC INTERGENIC . . PASS 0 no . 5,0 267,106
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:46797:0:4:1:0:0:1 TRANSLOCATION BND chr6 132372655 chr6 132372917 MOXD1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 32,0 154,8 MantaBND:46797:0:4:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:46797:0:4:1:0:0:0 TRANSLOCATION BND chr6 132372909 chr6 132372663 MOXD1 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 32,0 154,8 MantaBND:46797:0:4:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:52628:52628:5:0:0:1 TRANSLOCATION BND chr6 137882363 chr6 137882485 TNFAIP3 EXON:9 + INTERGENIC INTERGENIC - . PASS 0 no . 26,0 188,6 MantaBND:0:52628:52628:5:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:52628:52628:5:0:0:0 TRANSLOCATION BND chr6 137882478 chr6 137882370 TNFAIP3 EXON:9 + INTERGENIC INTERGENIC - . PASS 0 no . 26,0 188,6 MantaBND:0:52628:52628:5:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:47089:0:2:0:0:0:1 TRANSLOCATION BND chr6 145800202 chr6 145800357 FBXO30&FBXO30-DT EXON:3 + FBXO30 EXON:3 - . MinSomaticScore 0 no . 15,0 77,4 MantaBND:47089:0:2:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:47089:0:2:0:0:0:0 TRANSLOCATION BND chr6 145800352 chr6 145800207 FBXO30&FBXO30-DT INTRON:2 + FBXO30 INTRON:2 - . MinSomaticScore 0 no . 15,0 77,4 MantaBND:47089:0:2:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:43569:43624:1:0:0 DUPLICATION DUP chr7 13930692 chr7 13931651 ETV1 EXON:7 . INTERGENIC INTERGENIC . . MinSomaticScore 959 no . 63,2 436,2
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:40429:0:0:3:0:0:1 TRANSLOCATION BND chr7 44697231 chr7 44697381 OGDH INTRON:16 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 220,8 MantaBND:40429:0:0:3:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:40429:0:0:3:0:0:0 TRANSLOCATION BND chr7 44697376 chr7 44697236 OGDH EXON:17 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 220,8 MantaBND:40429:0:0:3:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:45042:45043:2:2:0 DUPLICATION DUP chr7 55171912 chr7 55172437 EGFR EXON:15 . INTERGENIC INTERGENIC . . MinSomaticScore 525 no . 41,2 336,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:45042:45050:0:0:0:0 TRANSLOCATION BND chr7 55172037 chr7 55175606 EGFR INTRON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 122,1 530,8 MantaBND:0:45042:45050:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:45042:45050:0:0:0:1 TRANSLOCATION BND chr7 55175603 chr7 55172040 EGFR INTRON:19 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 122,1 530,8 MantaBND:0:45042:45050:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:40628:0:0:0:0:0:0 TRANSLOCATION BND chr7 56084191 chr7 56084272 PHKG1 EXON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 65,2 286,4 MantaBND:40628:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:40628:0:0:0:0:0:1 TRANSLOCATION BND chr7 56084266 chr7 56084197 PHKG1 INTRON:4 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 65,2 286,4 MantaBND:40628:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:39065:39151:0:0:0:1 TRANSLOCATION BND chr7 92651838 chr22 23303563 BCR&ENSG00000286742 INTRON:1 - BCR&CDK6 INTRON:5 + . PASS 0 no . 55,4 247,8 MantaBND:0:39065:39151:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:34416:0:1:0:0:0:1 TRANSLOCATION BND chr7 148809093 chr18 46821057 EZH2&PIAS2 EXON:19 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 36,1 170,6 MantaBND:34416:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:43024:2:2:2:0:0:0 TRANSLOCATION BND chr7 148811704 chr7 148811857 EZH2 EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 19,1 119,6 MantaBND:43024:2:2:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:43024:2:2:2:0:0:1 TRANSLOCATION BND chr7 148811852 chr7 148811709 EZH2 INTRON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 19,1 119,6 MantaBND:43024:2:2:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:48234:48234:2:0:0:1 TRANSLOCATION BND chr7 150572872 chr7 150573032 GIMAP4 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 21,2 140,4 MantaBND:0:48234:48234:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:48234:48234:2:0:0:0 TRANSLOCATION BND chr7 150573026 chr7 150572878 GIMAP4 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 21,2 140,4 MantaBND:0:48234:48234:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:80122:0:1:0:0:0:0 TRANSLOCATION BND chr8 3367210 chr8 3367277 CSMD1 EXON:21 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 75,0 281,5 MantaBND:80122:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:80122:0:1:0:0:0:1 TRANSLOCATION BND chr8 3367272 chr8 3367215 CSMD1 INTRON:20 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 75,0 281,5 MantaBND:80122:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:84311:84311:12:1:0:0 TRANSLOCATION BND chr8 32761421 chr8 32761615 NRG1 INTRON:12 + INTERGENIC INTERGENIC - . PASS 0 no . 16,2 94,3 MantaBND:0:84311:84311:12:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:84311:84311:12:1:0:1 TRANSLOCATION BND chr8 32761604 chr8 32761432 NRG1 INTRON:12 + INTERGENIC INTERGENIC - . PASS 0 no . 16,2 94,3 MantaBND:0:84311:84311:12:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:57570:57572:0:1:0:0 TRANSLOCATION BND chr8 38272479 chr4 49003788 CWH43&NSD3 EXON:24 + CWH43&DDHD2 GENE - . MinSomaticScore 0 no . 147,1 556,8 MantaBND:0:57570:57572:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:84978:84978:3:0:0:0 TRANSLOCATION BND chr8 38319646 chr8 38319862 NSD3 INTRON:8 + INTERGENIC INTERGENIC - . PASS 0 no . 8,0 62,6 MantaBND:0:84978:84978:3:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:84978:84978:3:0:0:1 TRANSLOCATION BND chr8 38319857 chr8 38319651 NSD3 INTRON:8 + INTERGENIC INTERGENIC - . PASS 0 no . 8,0 62,6 MantaBND:0:84978:84978:3:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:81258:1:3:0:0:0:1 TRANSLOCATION BND chr8 60781233 chr8 60781418 CHD7 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 33,2 105,7 MantaBND:81258:1:3:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:81258:1:3:0:0:0:0 TRANSLOCATION BND chr8 60781412 chr8 60781239 CHD7 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 33,2 105,7 MantaBND:81258:1:3:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:85818:85818:0:1:0:0 TRANSLOCATION BND chr8 69623907 chr8 69623992 SULF1 INTRON:14 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 9,1 82,6 MantaBND:0:85818:85818:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:85818:85818:0:1:0:1 TRANSLOCATION BND chr8 69623989 chr8 69623910 SULF1 EXON:15 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 9,1 82,6 MantaBND:0:85818:85818:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:86232:86232:3:0:0:1 TRANSLOCATION BND chr8 100287829 chr8 100288163 RNF19A EXON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 138,7 MantaBND:0:86232:86232:3:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:86232:86232:3:0:0:0 TRANSLOCATION BND chr8 100288159 chr8 100287833 RNF19A EXON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 138,7 MantaBND:0:86232:86232:3:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:82238:0:0:1:0:0:0 TRANSLOCATION BND chr8 112685564 chr8 112685664 CSMD3 EXON:15 + INTERGENIC INTERGENIC - . PASS 0 no . 28,1 141,8 MantaBND:82238:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:82238:0:0:1:0:0:1 TRANSLOCATION BND chr8 112685658 chr8 112685570 CSMD3 EXON:15 + INTERGENIC INTERGENIC - . PASS 0 no . 28,1 141,8 MantaBND:82238:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:77080:0:1:0:0:0 DUPLICATION DUP chr9 5765454 chr9 5765593 RIC1 EXON:10 . ERMP1 GENE . . MinSomaticScore 139 no . 21,1 83,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:80917:80919:2:0:0 DUPLICATION DUP chr9 83968816 chr9 83969582 HNRNPK INTRON:17 . ENSG00000235298 INTERGENIC . . PASS 766 no . 23,2 146,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:79313:0:1:0:0:0 DUPLICATION DUP chr9 125018830 chr9 125019257 SCAI INTRON:10 . INTERGENIC INTERGENIC . . PASS 427 no . 16,2 55,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:79789:0:0:1:0:0:0 TRANSLOCATION BND chr9 133110420 chr9 133110494 ENSG00000285245&RALGDS EXON:3 + RALGDS EXON:3 - . PASS 0 no . 95,1 373,8 MantaBND:79789:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:79789:0:0:1:0:0:1 TRANSLOCATION BND chr9 133110490 chr9 133110424 ENSG00000285245&RALGDS INTRON:2 + RALGDS INTRON:2 - . PASS 0 no . 95,1 373,8 MantaBND:79789:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:14861:14867:0:1:0:0 TRANSLOCATION BND chr10 60072098 chr10 60074429 ANK3 EXON:37 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 26,0 105,4 MantaBND:0:14861:14867:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:14861:14867:0:1:0:1 TRANSLOCATION BND chr10 60074422 chr10 60072105 ANK3 EXON:37 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 26,0 105,4 MantaBND:0:14861:14867:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:15009:15009:1:0:0:1 TRANSLOCATION BND chr10 68573214 chr10 68573644 TET1 EXON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 27,0 171,6 MantaBND:0:15009:15009:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:15009:15009:1:0:0:0 TRANSLOCATION BND chr10 68573639 chr10 68573219 TET1 EXON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 27,0 171,6 MantaBND:0:15009:15009:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:15787:0:1:1:0:0:0 TRANSLOCATION BND chr10 74972595 chr10 74972729 KAT6B EXON:7 + INTERGENIC INTERGENIC - . PASS 0 no . 24,2 123,3 MantaBND:15787:0:1:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:15787:0:1:1:0:0:1 TRANSLOCATION BND chr10 74972722 chr10 74972602 KAT6B INTRON:7 + INTERGENIC INTERGENIC - . PASS 0 no . 24,2 123,3 MantaBND:15787:0:1:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:15935:15937:0:1:0:1 TRANSLOCATION BND chr10 102631346 chr11 57712644 ENSG00000288534&SUFU EXON:12 - SUFU&TMX2 EXON:12 + . MinSomaticScore 0 no . 116,2 492,4 MantaBND:0:15935:15937:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17165:0:0:0:0:0:0 TRANSLOCATION BND chr10 116561592 chr10 116561701 PNLIP EXON:12 + INTERGENIC INTERGENIC - . PASS 0 no . 13,1 73,6 MantaBND:17165:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17165:0:0:0:0:0:1 TRANSLOCATION BND chr10 116561694 chr10 116561599 PNLIP INTRON:12 + INTERGENIC INTERGENIC - . PASS 0 no . 13,1 73,6 MantaBND:17165:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:16372:16383:0:1:0:0 TRANSLOCATION BND chr10 121570351 chr10 121570450 FGFR2 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 94,0 587,7 MantaBND:0:16372:16383:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:16372:16383:0:1:0:1 TRANSLOCATION BND chr10 121570446 chr10 121570355 FGFR2 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 94,0 587,7 MantaBND:0:16372:16383:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17438:0:0:0:2:0:0 TRANSLOCATION BND chr10 123051162 chr10 123051362 ACADSB EXON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 20,0 67,5 MantaBND:17438:0:0:0:2:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:17438:0:0:0:2:0:1 TRANSLOCATION BND chr10 123051357 chr10 123051167 ACADSB INTRON:9 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 20,0 67,5 MantaBND:17438:0:0:0:2:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:10576:10577:0:0:0:0 TRANSLOCATION BND chr11 17720364 chr19 1206667 MYOD1&STK11 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 253,3 1005,3 MantaBND:0:10576:10577:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:15935:15937:0:1:0:0 TRANSLOCATION BND chr11 57712644 chr10 102631346 SUFU&TMX2 EXON:1 - ENSG00000288534&SUFU GENE + . MinSomaticScore 0 no . 116,2 492,4 MantaBND:0:15935:15937:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:13644:13645:0:0:0 DUPLICATION DUP chr11 120478271 chr11 120480376 ARHGEF12 EXON:37 . INTERGENIC INTERGENIC . . MinSomaticScore 2105 no . 23,0 127,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:14004:1:2:1:0:0:0 TRANSLOCATION BND chr11 128970405 chr11 128970630 ARHGAP32 EXON:23 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 50,1 232,6 MantaBND:14004:1:2:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:14004:1:2:1:0:0:1 TRANSLOCATION BND chr11 128970624 chr11 128970411 ARHGAP32 EXON:23 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 50,1 232,6 MantaBND:14004:1:2:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:4270:4270:0:0:0:0 TRANSLOCATION BND chr12 5044590 chr12 5044694 KCNA5 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 157,1 604,4 MantaBND:0:4270:4270:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:4270:4270:0:0:0:1 TRANSLOCATION BND chr12 5044689 chr12 5044595 KCNA5 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 157,1 604,4 MantaBND:0:4270:4270:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:4581:4586:1:5:0:0 TRANSLOCATION BND chr12 11760486 chr12 11760733 ETV6 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 27,0 92,5 MantaBND:0:4581:4586:1:5:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:4581:4586:1:5:0:1 TRANSLOCATION BND chr12 11760727 chr12 11760492 ETV6 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 27,0 92,5 MantaBND:0:4581:4586:1:5:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:5809:5809:5:0:0:0 TRANSLOCATION BND chr12 18281986 chr12 18282077 PIK3C2G&RERGL GENE + RERGL GENE - . MinSomaticScore 0 no . 31,1 134,8 MantaBND:0:5809:5809:5:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:5809:5809:5:0:0:1 TRANSLOCATION BND chr12 18282069 chr12 18281994 PIK3C2G&RERGL GENE + RERGL GENE - . MinSomaticScore 0 no . 31,1 134,8 MantaBND:0:5809:5809:5:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:5097:1:2:0:2:0 DUPLICATION DUP chr12 26596891 chr12 26597162 ITPR2 INTRON:31 . INTERGENIC INTERGENIC . . MinSomaticScore 271 no . 43,2 229,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:6369:6369:24:0:0:0 TRANSLOCATION BND chr12 31984902 chr12 31985329 RESF1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 161,2 MantaBND:0:6369:6369:24:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:6369:6369:27:0:0:0 TRANSLOCATION BND chr12 31984915 chr12 31985420 RESF1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 155,2 MantaBND:0:6369:6369:27:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:6369:6369:24:0:0:1 TRANSLOCATION BND chr12 31985322 chr12 31984909 RESF1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 161,2 MantaBND:0:6369:6369:24:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:6369:6369:27:0:0:1 TRANSLOCATION BND chr12 31985416 chr12 31984919 RESF1 EXON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 33,1 155,2 MantaBND:0:6369:6369:27:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:5854:0:0:3:0:0:1 TRANSLOCATION BND chr12 49023984 chr12 49024082 ENSG00000288710&KMT2D INTRON:1 + KMT2D INTRON:52 - . MinSomaticScore 0 no . 24,0 143,6 MantaBND:5854:0:0:3:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:5854:0:0:3:0:0:0 TRANSLOCATION BND chr12 49024076 chr12 49023990 KMT2D EXON:52 + ENSG00000288710&KMT2D EXON:52 - . MinSomaticScore 0 no . 24,0 143,6 MantaBND:5854:0:0:3:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:6502:6601:0:0:0:0 TRANSLOCATION BND chr12 49030278 chr12 49030449 KMT2D INTRON:43 + INTERGENIC INTERGENIC - . PASS 0 no . 118,0 892,14 MantaBND:0:6502:6601:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:6502:6601:0:0:0:1 TRANSLOCATION BND chr12 49030440 chr12 49030287 KMT2D INTRON:42 + INTERGENIC INTERGENIC - . PASS 0 no . 118,0 892,14 MantaBND:0:6502:6601:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:7074:7074:1:0:0:1 TRANSLOCATION BND chr12 50107562 chr12 50107713 GPD1 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 87,1 461,8 MantaBND:0:7074:7074:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:7074:7074:1:0:0:0 TRANSLOCATION BND chr12 50107707 chr12 50107568 GPD1 EXON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 87,1 461,8 MantaBND:0:7074:7074:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:6311:0:0:0:0:0:0 TRANSLOCATION BND chr12 54241770 chr12 54241880 CBX5 EXON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 118,8 MantaBND:6311:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:6311:0:0:0:0:0:1 TRANSLOCATION BND chr12 54241875 chr12 54241775 CBX5 EXON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 118,8 MantaBND:6311:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25561:25563:0:0:0:1 TRANSLOCATION BND chr12 56721156 chr15 23364471 GOLGA8S&NACA EXON:3 - ENSG00000285625&GOLGA8S INTRON:6 + . MinSomaticScore 0 no . 68,0 332,5 MantaBND:0:25561:25563:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:8490:8493:0:2:0:0 TRANSLOCATION BND chr12 100380856 chr12 100380953 SLC17A8 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 75,0 306,6 MantaBND:0:8490:8493:0:2:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:8490:8493:0:2:0:1 TRANSLOCATION BND chr12 100380950 chr12 100380859 SLC17A8 EXON:2 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 75,0 306,6 MantaBND:0:8490:8493:0:2:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:7861:0:1:0:0:0 DUPLICATION DUP chr12 101344598 chr12 101373484 UTP20 EXON:45 . INTERGENIC INTERGENIC . . PASS 28886 no . 33,1 131,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8242:0:0:0:0:0:0 TRANSLOCATION BND chr12 109568742 chr12 109568853 MMAB INTRON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 29,3 178,6 MantaBND:8242:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:8242:0:0:0:0:0:1 TRANSLOCATION BND chr12 109568849 chr12 109568746 MMAB EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 29,3 178,6 MantaBND:8242:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:9092:9092:1:0:0 DUPLICATION DUP chr12 116576124 chr12 116576392 ENSG00000275898 INTERGENIC . MAP1LC3B2 EXON:2 . . MinSomaticScore 268 no . 23,3 153,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaINS:9206:0:0:0:3:0 INSERTION INS chr12 131918730 chr12 131918730 ULK1 INTRON:23 . INTERGENIC INTERGENIC . . PASS 213 no . 60,0 192,19
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:9611:9614:0:2:0 DUPLICATION DUP chr12 133106230 chr12 133106566 ZNF891 INTERGENIC . ZNF140 GENE . . MinSomaticScore 336 no . 6,2 104,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3249:0:0:2:0:0:1 TRANSLOCATION BND chr13 50934986 chr13 50935101 RNASEH2B EXON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 17,1 96,8 MantaBND:3249:0:0:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:3249:0:0:2:0:0:0 TRANSLOCATION BND chr13 50935097 chr13 50934990 RNASEH2B INTRON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 17,1 96,8 MantaBND:3249:0:0:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3661:3661:2:0:0:0 TRANSLOCATION BND chr13 101712373 chr13 101712614 FGF14&ITGBL1 INTRON:9 + ITGBL1 INTRON:9 - . PASS 0 no . 32,0 168,7 MantaBND:0:3661:3661:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:3661:3661:2:0:0:1 TRANSLOCATION BND chr13 101712610 chr13 101712377 FGF14&ITGBL1 INTRON:9 + ITGBL1 INTRON:9 - . PASS 0 no . 32,0 168,7 MantaBND:0:3661:3661:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:27885:0:0:1:2:0:1 TRANSLOCATION BND chr14 23183050 chr14 23183226 SLC7A8 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 43,0 281,19 MantaBND:27885:0:0:1:2:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:27885:0:0:1:2:0:0 TRANSLOCATION BND chr14 23183220 chr14 23183056 SLC7A8 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 43,0 281,19 MantaBND:27885:0:0:1:2:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:29966:29966:0:0:0:0 TRANSLOCATION BND chr14 36516489 chr14 36516593 ENSG00000283098&NKX2-1 EXON:3 + ENSG00000283098&SFTA3 INTRON:2 - . PASS 0 no . 38,0 226,10 MantaBND:0:29966:29966:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:29966:29966:0:0:0:1 TRANSLOCATION BND chr14 36516586 chr14 36516496 ENSG00000283098&NKX2-1 EXON:3 + ENSG00000283098&SFTA3 INTRON:2 - . PASS 0 no . 38,0 226,10 MantaBND:0:29966:29966:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:28478:0:0:0:0:0:0 TRANSLOCATION BND chr14 51022820 chr14 51022917 TRIM9 INTRON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 81,1 308,6 MantaBND:28478:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:28478:0:0:0:0:0:1 TRANSLOCATION BND chr14 51022911 chr14 51022826 TRIM9 EXON:3 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 81,1 308,6 MantaBND:28478:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:30782:30786:1:1:0 DUPLICATION DUP chr14 81144351 chr14 81144547 TSHR EXON:8 . ENSG00000284959 EXON:2 . . PASS 196 no . 26,0 165,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:31085:31085:0:0:0:1 TRANSLOCATION BND chr14 101562245 chr14 101562353 DIO3 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 60,1 355,8 MantaBND:0:31085:31085:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:31085:31085:0:0:0:0 TRANSLOCATION BND chr14 101562346 chr14 101562252 DIO3 EXON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 60,1 355,8 MantaBND:0:31085:31085:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:30170:0:0:0:0:0:0 TRANSLOCATION BND chr14 105226070 chr14 105226177 BRF1 EXON:10 + INTERGENIC INTERGENIC - . PASS 0 no . 64,1 279,8 MantaBND:30170:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:30170:0:0:0:0:0:1 TRANSLOCATION BND chr14 105226176 chr14 105226071 BRF1 INTRON:9 + INTERGENIC INTERGENIC - . PASS 0 no . 64,1 279,8 MantaBND:30170:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25561:25563:0:0:0:0 TRANSLOCATION BND chr15 23364471 chr12 56721156 ENSG00000285625&GOLGA8S INTRON:16 - GOLGA8S&NACA INTRON:16 + . MinSomaticScore 0 no . 68,0 332,5 MantaBND:0:25561:25563:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25887:25893:0:2:0:0 TRANSLOCATION BND chr15 38349292 chr15 38351929 SPRED1 INTRON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 14,1 72,2 MantaBND:0:25887:25893:0:2:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25887:25893:1:0:0:0 TRANSLOCATION BND chr15 38349429 chr15 38352443 SPRED1 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 116,2 MantaBND:0:25887:25893:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25887:25893:0:2:0:1 TRANSLOCATION BND chr15 38351923 chr15 38349298 SPRED1 EXON:7 + INTERGENIC INTERGENIC - . PASS 0 no . 14,1 72,2 MantaBND:0:25887:25893:0:2:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25887:25893:1:0:0:1 TRANSLOCATION BND chr15 38352436 chr15 38349436 SPRED1 EXON:7 + INTERGENIC INTERGENIC - . PASS 0 no . 30,1 116,2 MantaBND:0:25887:25893:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25887:25889:3:1:0:0 TRANSLOCATION BND chr15 38352904 chr15 38353342 SPRED1 EXON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 34,1 155,6 MantaBND:0:25887:25889:3:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25887:25889:3:1:0:1 TRANSLOCATION BND chr15 38353336 chr15 38352910 SPRED1 EXON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 34,1 155,6 MantaBND:0:25887:25889:3:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25999:26003:0:0:0:0 TRANSLOCATION BND chr15 40622285 chr15 40623802 KNL1 EXON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 18,0 124,6 MantaBND:0:25999:26003:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:25999:26003:0:0:0:1 TRANSLOCATION BND chr15 40623796 chr15 40622291 KNL1 EXON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 18,0 124,6 MantaBND:0:25999:26003:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:25428:0:0:0:0:0:1 TRANSLOCATION BND chr15 41900633 chr15 41900707 EHD4 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 66,1 325,8 MantaBND:25428:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:25428:0:0:0:0:0:0 TRANSLOCATION BND chr15 41900701 chr15 41900639 EHD4 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 66,1 325,8 MantaBND:25428:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:25968:0:0:0:0:0:1 TRANSLOCATION BND chr15 50607216 chr15 50607327 TRPM7 EXON:20 + INTERGENIC INTERGENIC - . PASS 0 no . 24,2 95,6 MantaBND:25968:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:25968:0:0:0:0:0:0 TRANSLOCATION BND chr15 50607320 chr15 50607223 TRPM7 EXON:20 + INTERGENIC INTERGENIC - . PASS 0 no . 24,2 95,6 MantaBND:25968:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:26093:0:0:1:0:0:0 TRANSLOCATION BND chr15 52340324 chr15 52340428 MYO5A EXON:32 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 63,1 315,8 MantaBND:26093:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:26093:0:0:1:0:0:1 TRANSLOCATION BND chr15 52340421 chr15 52340331 MYO5A INTRON:31 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 63,1 315,8 MantaBND:26093:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:26863:26864:0:0:0:0 TRANSLOCATION BND chr15 66490716 chr15 66490902 ENSG00000261351&MAP2K1 EXON:2 + MAP2K1&SNAPC5 GENE - . PASS 0 no . 25,0 240,8 MantaBND:0:26863:26864:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:26863:26864:0:0:0:1 TRANSLOCATION BND chr15 66490899 chr15 66490719 ENSG00000261351&MAP2K1 INTRON:1 + MAP2K1&SNAPC5 GENE - . PASS 0 no . 25,0 240,8 MantaBND:0:26863:26864:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:26722:26906:0:0:0 DUPLICATION DUP chr15 67195057 chr15 67195227 SMAD3 EXON:9 . SMAD3-AAGAB INTERGENIC . . PASS 170 no . 15,1 150,5
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:26795:1:1:0:0:0:1 TRANSLOCATION BND chr15 71991254 chr15 71991374 ENSG00000261632&MYO9A INTRON:10 + MYO9A INTRON:10 - . PASS 0 no . 4,2 23,4 MantaBND:26795:1:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:26795:1:1:0:0:0:0 TRANSLOCATION BND chr15 71991367 chr15 71991261 ENSG00000261632&MYO9A INTRON:10 + MYO9A INTRON:10 - . PASS 0 no . 4,2 23,4 MantaBND:26795:1:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:26962:0:0:0:0:0:0 TRANSLOCATION BND chr15 75470618 chr15 75470720 PTPN9 INTRON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 20,1 88,8 MantaBND:26962:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:26962:0:0:0:0:0:1 TRANSLOCATION BND chr15 75470714 chr15 75470624 PTPN9 EXON:11 + INTERGENIC INTERGENIC - . PASS 0 no . 20,1 88,8 MantaBND:26962:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaINS:0:27333:27333:0:10:0 INSERTION INS chr15 82344702 chr15 82344723 GOLGA6L10 GENE . INTERGENIC INTERGENIC . . PASS 0 no . 77,0 779,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:27452:27504:0:2:0 DELETION DEL chr15 87868029 chr15 87870912 NTRK3 GENE . INTERGENIC INTERGENIC . . MinSomaticScore -2883 no . 26,0 148,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:27768:27802:2:1:0:0 TRANSLOCATION BND chr15 87967835 chr15 87968180 NTRK3 INTRON:12 + INTERGENIC INTERGENIC - . PASS 0 no . 25,1 162,8 MantaBND:0:27768:27802:2:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:27768:27802:2:1:0:1 TRANSLOCATION BND chr15 87968175 chr15 87967840 NTRK3 INTRON:12 + INTERGENIC INTERGENIC - . PASS 0 no . 25,1 162,8 MantaBND:0:27768:27802:2:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:28118:28245:3:0:0 DELETION DEL chr15 88014567 chr15 88016322 NTRK3 INTRON:12 . INTERGENIC INTERGENIC . . PASS -1755 no . 21,0 128,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:29104:29104:1:0:0 DELETION DEL chr15 89261495 chr15 89261564 FANCI INTRON:4 . INTERGENIC INTERGENIC . . PASS -69 no . 9,0 97,5
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:23198:23198:5:0:0 DELETION DEL chr16 10182836 chr16 10182912 GRIN2A INTERGENIC . INTERGENIC INTERGENIC . . PASS -76 no . 123,0 578,12
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:23585:23585:7:1:0:1 TRANSLOCATION BND chr16 23629710 chr16 23629862 PALB2 EXON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 67,2 311,4 MantaBND:0:23585:23585:7:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:23585:23585:7:1:0:0 TRANSLOCATION BND chr16 23629856 chr16 23629716 PALB2 EXON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 67,2 311,4 MantaBND:0:23585:23585:7:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:23000:0:1:0:0:0:0 TRANSLOCATION BND chr16 24092908 chr16 24092974 PRKCB EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 28,0 93,7 MantaBND:23000:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:23000:0:1:0:0:0:1 TRANSLOCATION BND chr16 24092968 chr16 24092914 PRKCB INTRON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 28,0 93,7 MantaBND:23000:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:23624:23625:0:0:0:0 TRANSLOCATION BND chr16 24191311 chr19 17893874 PRKCB&SLC5A5 INTRON:16 - INTERGENIC INTERGENIC + . MinSomaticScore 0 no . 24,0 222,5 MantaBND:0:23624:23625:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:23916:0:0:1:1:1 DELETION DEL chr16 67082287 chr16 67082921 CBFB EXON:5 . INTERGENIC INTERGENIC . . MinSomaticScore -634 no . 37,0 151,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:24460:1:3:0:0:0 DUPLICATION DUP chr16 75694135 chr16 75694364 DUXB EXON:5 . RN7SL520P INTERGENIC . . MinSomaticScore 229 no . 23,3 156,6
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:24669:0:0:1:0:0:0 TRANSLOCATION BND chr16 85914317 chr16 85914459 IRF8 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 71,1 421,8 MantaBND:24669:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:24669:0:0:1:0:0:1 TRANSLOCATION BND chr16 85914451 chr16 85914325 IRF8 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 71,1 421,8 MantaBND:24669:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:16979:16979:0:0:0:1 TRANSLOCATION BND chr17 1345488 chr17 1345581 YWHAE EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 44,4 199,4 MantaBND:0:16979:16979:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:16979:16979:0:0:0:0 TRANSLOCATION BND chr17 1345579 chr17 1345490 YWHAE INTRON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 44,4 199,4 MantaBND:0:16979:16979:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:18270:18273:0:0:0 DUPLICATION DUP chr17 28858730 chr17 28859041 MIR451B INTERGENIC . ENSG00000264066 INTERGENIC . . MinSomaticScore 311 no . 82,3 309,5
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:18461:18461:0:0:0:0 TRANSLOCATION BND chr17 31155834 chr17 31155912 NF1 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 4,1 32,3 MantaBND:0:18461:18461:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:18461:18461:0:0:0:1 TRANSLOCATION BND chr17 31155902 chr17 31155844 NF1 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 4,1 32,3 MantaBND:0:18461:18461:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:19437:1:1:0:0:0:1 TRANSLOCATION BND chr17 35553454 chr17 35553560 ENSG00000267359&SLFN14 INTRON:2 + SLFN14 INTRON:2 - . PASS 0 no . 12,2 52,5 MantaBND:19437:1:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:19437:1:1:0:0:0:0 TRANSLOCATION BND chr17 35553554 chr17 35553460 ENSG00000267359&SLFN14 INTRON:2 + SLFN14 INTRON:2 - . PASS 0 no . 12,2 52,5 MantaBND:19437:1:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:19808:0:0:1:0:0:1 TRANSLOCATION BND chr17 40388495 chr17 40388635 TOP2A GENE + INTERGENIC INTERGENIC - . PASS 0 no . 22,1 137,10 MantaBND:19808:0:0:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:19808:0:0:1:0:0:0 TRANSLOCATION BND chr17 40388628 chr17 40388502 TOP2A EXON:35 + INTERGENIC INTERGENIC - . PASS 0 no . 22,1 137,10 MantaBND:19808:0:0:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:19817:0:0:0:0:0:1 TRANSLOCATION BND chr17 40398646 chr17 40398786 TOP2A INTRON:26 + INTERGENIC INTERGENIC - . PASS 0 no . 32,1 179,8 MantaBND:19817:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:19817:0:0:0:0:0:0 TRANSLOCATION BND chr17 40398781 chr17 40398651 TOP2A EXON:26 + INTERGENIC INTERGENIC - . PASS 0 no . 32,1 179,8 MantaBND:19817:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:19966:0:0:0:0:0 DELETION DEL chr17 41487828 chr17 41488230 KRT36 INTRON:3 . INTERGENIC INTERGENIC . . MinSomaticScore -402 no . 46,1 236,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:20136:20136:0:0:0:1 TRANSLOCATION BND chr17 42346584 chr17 42346730 STAT3 EXON:3 + INTERGENIC INTERGENIC - . PASS 0 no . 27,0 235,7 MantaBND:0:20136:20136:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:20136:20136:0:0:0:0 TRANSLOCATION BND chr17 42346723 chr17 42346591 STAT3 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 27,0 235,7 MantaBND:0:20136:20136:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:20499:20502:0:0:0 DELETION DEL chr17 43091050 chr17 43091676 BRCA1 EXON:10 . INTERGENIC INTERGENIC . . PASS -626 no . 38,0 181,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:21377:21377:20:2:0 DUPLICATION DUP chr17 58416581 chr17 58416747 ENSG00000285897 EXON:1 . HSF5 INTERGENIC . . MinSomaticScore 166 no . 29,2 139,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:21491:21491:2:0:0:1 TRANSLOCATION BND chr17 58508489 chr17 58508561 MTMR4 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 81,1 291,8 MantaBND:0:21491:21491:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:21491:21491:2:0:0:0 TRANSLOCATION BND chr17 58508560 chr17 58508490 MTMR4 EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 81,1 291,8 MantaBND:0:21491:21491:2:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:21801:0:1:0:1:0 DELETION DEL chr17 79094543 chr17 79097303 RBFOX3 EXON:13 . INTERGENIC INTERGENIC . . MinSomaticScore -2760 no . 96,1 350,8
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:37414:37414:1:0:0:1 TRANSLOCATION BND chr18 35339985 chr18 35340668 ZNF24 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 22,1 131,8 MantaBND:0:37414:37414:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:37414:37414:1:0:0:0 TRANSLOCATION BND chr18 35340664 chr18 35339989 ZNF24 INTRON:2 + INTERGENIC INTERGENIC - . PASS 0 no . 22,1 131,8 MantaBND:0:37414:37414:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:34416:0:1:0:0:0:0 TRANSLOCATION BND chr18 46821053 chr7 148809097 EZH2&PIAS2 EXON:12 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 36,1 170,6 MantaBND:34416:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:35164:36974:0:0:0:0 TRANSLOCATION BND chr18 76913784 chr19 58068010 ZNF135&ZNF236 EXON:18 - INTERGENIC INTERGENIC + . MinSomaticScore 0 no . 76,1 483,8 MantaBND:0:35164:36974:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:10576:10577:0:0:0:1 TRANSLOCATION BND chr19 1206662 chr11 17720369 MYOD1&STK11 INTRON:1 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 253,3 1005,3 MantaBND:0:10576:10577:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:30455:0:1:0:2:0 DUPLICATION DUP chr19 2232238 chr19 2232572 SF3A2 INTERGENIC . MIR1227 INTERGENIC . . PASS 334 no . 99,0 541,11
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:31737:31737:16:2:0:0 TRANSLOCATION BND chr19 3123340 chr19 3123425 GNA11 EXON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 127,1 574,8 MantaBND:0:31737:31737:16:2:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:31737:31737:16:2:0:1 TRANSLOCATION BND chr19 3123419 chr19 3123346 GNA11 EXON:7 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 127,1 574,8 MantaBND:0:31737:31737:16:2:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDEL:0:32344:32386:0:0:0 DELETION DEL chr19 3805985 chr19 8949917 ZFR2 GENE . 5S_rRNA&ACER1&ACSBG2&ACTL9&ADAMTS10&ADGRE1&ADGRE4P&ALKBH7&ANGPTL4&ANKRD24&ARHGEF18&ARHGEF18-AS1&ARRDC5&ATCAY&C3&CAMSAP3&CAPS&CATSPERD&CCL25&CD209&CD320&CD70&CERS4&CHAF1A&CLEC4G&CLEC4GP1&CLEC4M&CLIC4P2&CLPP&CRB3&CREB3L3&CTXN1&DAPK3&DENND1C&DPP9&DPP9-AS1&DUS3L&EBI3&EEF2&EIF1P6&ELAVL1&ENSG00000167774&ENSG00000214248&ENSG00000214347&ENSG00000260500&ENSG00000266941&ENSG00000267011&ENSG00000267030&ENSG00000267157&ENSG00000267255&ENSG00000267262&ENSG00000267299&ENSG00000267314&ENSG00000267385&ENSG00000267408&ENSG00000267415&ENSG00000267484&ENSG00000267550&ENSG00000267563&ENSG00000267571&ENSG00000267589&ENSG00000267709&ENSG00000267740&ENSG00000267769&ENSG00000267939&ENSG00000267952&ENSG00000267980&ENSG00000267986&ENSG00000268120&ENSG00000268149&ENSG00000268191&ENSG00000268203&ENSG00000268204&ENSG00000268400&ENSG00000268536&ENSG00000268565&ENSG00000268614&ENSG00000268618&ENSG00000268670&ENSG00000268742&ENSG00000268845&ENSG00000268884&ENSG00000268922&ENSG00000268931&ENSG00000269139&ENSG00000269300&ENSG00000269318&ENSG00000269371&ENSG00000269385&ENSG00000269400&ENSG00000269425&ENSG00000269444&ENSG00000269604&ENSG00000269651&ENSG00000269680&ENSG00000269711&ENSG00000269761&ENSG00000269802&ENSG00000269807&ENSG00000269813&ENSG00000271717&ENSG00000274447&ENSG00000275234&ENSG00000276980&ENSG00000279426&ENSG00000279827&ENSG00000280091&ENSG00000280239&ENSG00000280247&ENSG00000280394&ENSG00000283679&ENSG00000284490&ENSG00000286138&ENSG00000287884&ENSG00000288669&ENSG00000289254&ENSG00000289255&ENSG00000289543&EVI5L&EXOSC3P2&FBN3&FCER2&FEM1A&FSD1&FTLP5&FUT3&FUT5&FUT6&GPR108&GTF2F1&HDGFL2&HNRNPM&HSD11B1L&INSR&KANK3&KDM4B&KHSRP&LONP1&LRG1&LRRC8E&LYPLA2P2&MAP2K2&MAP2K7&MARCHF2&MBD3L1&MBD3L2&MBD3L2B&MBD3L3&MBD3L4&MBD3L5&MCEMP1&MCOLN1&MICOS13&MIR3940&MIR4746&MIR4747&MIR4999&MIR637&MIR6790&MIR6791&MIR6792&MIR6885&MIR7-3&MIR7-3HG&MLLT1&MPND&MUC16&MYDGF&MYO1F&Metazoa_SRP&Metazoa_SRP&NDUFA11&NDUFA7&NFILZ&NMRK2&NRTN&OR2Z1&PCP2&PET100&PEX11G&PIAS4&PLIN3&PLIN4&PLIN5&PNPLA6&PRAM1&PRR22&PRR36&PSPN&PTPRS&RAB11B&RAB11B-AS1&RANBP3&RANBP3-DT&RETN&RFX2&RN7SL202P&RPL21P129&RPL23AP78&RPL32P34&RPL36&RPL7P50&RPS27AP19&RPS28&SAFB&SAFB2&SEMA6B&SH2D3A&SH3GL1&SHD&SIRT6&SLC25A23&SLC25A41&SNAPC2&SNORD37&SNRPEP4&STAP2&STXBP2&TEX45&TGFBR3L&TICAM1&TIMM44&TINCR&TMIGD2&TNFAIP8L1&TNFSF14&TNFSF9&TRAPPC5&TRIP10&TUBB4A&UBXN6&UHRF1&VAV1&VMAC&XAB2&YJU2&Y_RNA&ZBTB7A&ZFR2&ZNF358&ZNF414&ZNF557&ZNF558&ZNRF4 GENE . . PASS -5143932 no . 22,9 286,58
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:632:31986:0:0:0 DUPLICATION DUP chr19 7082891 chr19 7083227 ZNF557 EXON:7 . INTERGENIC INTERGENIC . . MinSomaticScore 336 no . 8,2 103,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:31015:0:1:0:1:0 DUPLICATION DUP chr19 10631059 chr19 10631527 SLC44A2 EXON:20 . INTERGENIC INTERGENIC . . MinSomaticScore 468 no . 53,2 363,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:23624:23625:0:0:0:1 TRANSLOCATION BND chr19 17893874 chr16 24191311 PRKCB&SLC5A5 EXON:15 - INTERGENIC INTERGENIC + . MinSomaticScore 0 no . 24,0 222,5 MantaBND:0:23624:23625:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:35777:35777:1:0:0:1 TRANSLOCATION BND chr19 29817536 chr19 29817646 CCNE1 EXON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 32,1 192,6 MantaBND:0:35777:35777:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:35777:35777:1:0:0:0 TRANSLOCATION BND chr19 29817640 chr19 29817542 CCNE1 INTRON:6 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 32,1 192,6 MantaBND:0:35777:35777:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:35164:36974:0:0:0:1 TRANSLOCATION BND chr19 58068010 chr18 76913784 ZNF135&ZNF236 EXON:4 - INTERGENIC INTERGENIC + . MinSomaticScore 0 no . 76,1 483,8 MantaBND:0:35164:36974:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:48750:48794:0:0:0:1 TRANSLOCATION BND chr19 58500396 chr6 7585684 DSP&SLC27A5 EXON:6 - INTERGENIC INTERGENIC + . MinSomaticScore 0 no . 104,2 558,2 MantaBND:0:48750:48794:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:37104:0:1:0:0:0:1 TRANSLOCATION BND chr20 32359297 chr20 32360516 ASXL1 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 105,0 391,12 MantaBND:37104:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:37104:0:1:0:0:0:0 TRANSLOCATION BND chr20 32360509 chr20 32359304 ASXL1 INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 105,0 391,12 MantaBND:37104:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:39038:39038:0:0:0:0 TRANSLOCATION BND chr20 34740699 chr20 34740828 NCOA6 EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 40,2 236,4 MantaBND:0:39038:39038:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:39038:39038:0:0:0:1 TRANSLOCATION BND chr20 34740821 chr20 34740706 NCOA6 EXON:11 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 40,2 236,4 MantaBND:0:39038:39038:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:37368:1:1:1:0:0:1 TRANSLOCATION BND chr20 35690534 chr20 35690645 NFS1 EXON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 19,1 124,8 MantaBND:37368:1:1:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:37368:1:1:1:0:0:0 TRANSLOCATION BND chr20 35690639 chr20 35690540 NFS1 INTRON:4 + INTERGENIC INTERGENIC - . PASS 0 no . 19,1 124,8 MantaBND:37368:1:1:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaDUP:TANDEM:0:41422:41422:2:0:0 DUPLICATION DUP chr20 46541428 chr20 46541682 OCSTAMP EXON:3 . INTERGENIC INTERGENIC . . MinSomaticScore 254 no . 78,2 352,4
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:41523:41526:0:1:0:1 TRANSLOCATION BND chr20 47652957 chr20 47653397 NCOA3 EXON:22 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 33,0 152,5 MantaBND:0:41523:41526:0:1:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:41523:41526:0:1:0:0 TRANSLOCATION BND chr20 47653391 chr20 47652963 NCOA3 INTRON:22 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 33,0 152,5 MantaBND:0:41523:41526:0:1:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:41717:41717:11:0:0:0 TRANSLOCATION BND chr20 53567332 chr20 53567389 ENSG00000197670&ZNF217 EXON:5 + ZNF217 EXON:5 - . PASS 0 no . 29,0 157,7 MantaBND:0:41717:41717:11:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:41717:41717:11:0:0:1 TRANSLOCATION BND chr20 53567385 chr20 53567336 ENSG00000197670&ZNF217 EXON:5 + ZNF217 EXON:5 - . PASS 0 no . 29,0 157,7 MantaBND:0:41717:41717:11:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:38209:0:1:1:0:0:0 TRANSLOCATION BND chr20 57565466 chr20 57565707 PCK1 EXON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 75,1 306,8 MantaBND:38209:0:1:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:38209:0:1:1:0:0:1 TRANSLOCATION BND chr20 57565700 chr20 57565473 PCK1 EXON:10 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 75,1 306,8 MantaBND:38209:0:1:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:18226:18226:9:0:0:0 TRANSLOCATION BND chr20 62882005 chr20 62882327 DIDO1 EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 99,2 459,4 MantaBND:0:18226:18226:9:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:18226:18226:9:0:0:1 TRANSLOCATION BND chr20 62882323 chr20 62882009 DIDO1 EXON:16 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 99,2 459,4 MantaBND:0:18226:18226:9:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:42166:42166:9:0:0:0 TRANSLOCATION BND chr21 34095763 chr21 34096230 SLC5A3 EXON:2 + MRPS6&SLC5A3 EXON:2 - . MinSomaticScore 0 no . 48,0 251,1 MantaBND:0:42166:42166:9:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:42166:42166:7:0:0:0 TRANSLOCATION BND chr21 34095947 chr21 34096064 SLC5A3 EXON:2 + MRPS6&SLC5A3 EXON:2 - . MinSomaticScore 0 no . 38,1 202,3 MantaBND:0:42166:42166:7:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:42166:42166:7:0:0:1 TRANSLOCATION BND chr21 34096059 chr21 34095952 SLC5A3 EXON:2 + MRPS6&SLC5A3 EXON:2 - . MinSomaticScore 0 no . 38,1 202,3 MantaBND:0:42166:42166:7:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:42166:42166:9:0:0:1 TRANSLOCATION BND chr21 34096222 chr21 34095771 SLC5A3 EXON:2 + MRPS6&SLC5A3 EXON:2 - . MinSomaticScore 0 no . 48,0 251,1 MantaBND:0:42166:42166:9:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:40180:40209:0:0:0:0 TRANSLOCATION BND chr21 36413119 chr22 41178564 CHAF1B&EP300 EXON:12 - CHAF1B&ENSG00000232754 EXON:12 + . PASS 0 no . 158,0 657,9 MantaBND:0:40180:40209:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:42474:42483:1:0:0:0 TRANSLOCATION BND chr21 41483234 chr21 41483688 TMPRSS2 INTRON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 58,2 350,6 MantaBND:0:42474:42483:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:42474:42483:1:0:0:1 TRANSLOCATION BND chr21 41483684 chr21 41483238 TMPRSS2 INTRON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 58,2 350,6 MantaBND:0:42474:42483:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:39065:39151:0:0:0:0 TRANSLOCATION BND chr22 23303563 chr7 92651838 BCR&ENSG00000286742 INTRON:16 - BCR&CDK6 INTRON:16 + . PASS 0 no . 55,4 247,8 MantaBND:0:39065:39151:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:35846:0:0:0:0:0:1 TRANSLOCATION BND chr22 37848133 chr22 37848236 ANKRD54 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 27,1 187,8 MantaBND:35846:0:0:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:35846:0:0:0:0:0:0 TRANSLOCATION BND chr22 37848234 chr22 37848135 ANKRD54 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 27,1 187,8 MantaBND:35846:0:0:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:40180:40209:0:0:0:1 TRANSLOCATION BND chr22 41178564 chr21 36413119 CHAF1B&EP300 EXON:31 - CHAF1B&ENSG00000232754 INTRON:1 + . PASS 0 no . 158,0 657,9 MantaBND:0:40180:40209:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:557:0:1:0:0:0:0 TRANSLOCATION BND chrX 40071095 chrX 40071274 BCOR EXON:6 + INTERGENIC INTERGENIC - . PASS 0 no . 23,2 97,3 MantaBND:557:0:1:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:557:0:1:0:0:0:1 TRANSLOCATION BND chrX 40071268 chrX 40071101 BCOR INTRON:5 + INTERGENIC INTERGENIC - . PASS 0 no . 23,2 97,3 MantaBND:557:0:1:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1001:1001:5:3:0:0 TRANSLOCATION BND chrX 67545059 chrX 67545429 AR INTRON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 94,3 527,6 MantaBND:0:1001:1001:5:3:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1001:1001:5:3:0:1 TRANSLOCATION BND chrX 67545425 chrX 67545063 AR EXON:1 + INTERGENIC INTERGENIC - . PASS 0 no . 94,3 527,6 MantaBND:0:1001:1001:5:3:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1456:1459:0:0:0:1 TRANSLOCATION BND chrX 71142434 chrX 71142965 MED12 EXON:45 + INTERGENIC INTERGENIC - . PASS 0 no . 31,1 203,2 MantaBND:0:1456:1459:0:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1456:1459:1:0:0:1 TRANSLOCATION BND chrX 71142478 chrX 71142925 MED12 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 48,1 277,2 MantaBND:0:1456:1459:1:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1456:1459:1:0:0:0 TRANSLOCATION BND chrX 71142921 chrX 71142482 MED12 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 48,1 277,2 MantaBND:0:1456:1459:1:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:0:1456:1459:0:0:0:0 TRANSLOCATION BND chrX 71142961 chrX 71142438 MED12 GENE + INTERGENIC INTERGENIC - . PASS 0 no . 31,1 203,2 MantaBND:0:1456:1459:0:0:0:1
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:1800:0:0:2:0:0:1 TRANSLOCATION BND chrX 120447831 chrX 120447952 LAMP2 INTRON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 10,1 85,8 MantaBND:1800:0:0:2:0:0:0
1136_7L-T1-TDNA-1_A23WGJTLT4_1 MantaBND:1800:0:0:2:0:0:0 TRANSLOCATION BND chrX 120447945 chrX 120447838 LAMP2 EXON:5 + INTERGENIC INTERGENIC - . MinSomaticScore 0 no . 10,1 85,8 MantaBND:1800:0:0:2:0:0:1
338 rows