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- Filename
- 1136_5BE-T1-TDNA-1_A23WGJTLT4_1_vs_1136_5BE-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/1136_5BE-T1-TDNA-1_A23WGJTLT4_1_vs_1136_5BE-N1-BDNA-1_A237CFYLT3_1/variants/dna_fusions/1136_5BE-T1-TDNA-1_A23WGJTLT4_1_vs_1136_5BE-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- hmnz-cgp-dna-exp0034-20260606-020246
- Published
- Jun 05, 2026 7:05 PM
Content
View in new tab| sample | sv_id | sv_type | svtype_standard | chr1 | pos1 | chr2 | pos2 | gene1 | region1 | strand1 | gene2 | region2 | strand2 | qual | filter | svlen | imprecise | tumor_gt | tumor_pr | tumor_sr | mate_id |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7211:0:0:0:3:0:0 | TRANSLOCATION | BND | chr1 | 25454052 | chr1 | 25454294 | MACO1 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 219,2 | 332,2 | MantaBND:7211:0:0:0:3:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7211:0:0:0:3:0:1 | TRANSLOCATION | BND | chr1 | 25454290 | chr1 | 25454056 | MACO1 | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 219,2 | 332,2 | MantaBND:7211:0:0:0:3:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:72392:72392:4:0:0 | DELETION | DEL | chr1 | 30908609 | chr1 | 30908827 | SDC3 | EXON:1 | . | SDC3-RN7SL371P | INTERGENIC | . | . | PASS | -218 | no | . | 153,0 | 308,14 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7271:0:0:0:0:0:1 | TRANSLOCATION | BND | chr1 | 42265186 | chr1 | 42265585 | FOXJ3 | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 76,2 | 118,4 | MantaBND:7271:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7271:0:0:0:0:0:0 | TRANSLOCATION | BND | chr1 | 42265578 | chr1 | 42265193 | FOXJ3 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 76,2 | 118,4 | MantaBND:7271:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7657:0:0:0:0:0:0 | TRANSLOCATION | BND | chr1 | 163347516 | chr1 | 163347587 | NUF2 | INTRON:11 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 16,5 | . | MantaBND:7657:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7657:0:0:0:0:0:1 | TRANSLOCATION | BND | chr1 | 163347587 | chr1 | 163347516 | NUF2 | INTRON:11 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 16,5 | . | MantaBND:7657:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7767:0:0:0:0:0:1 | TRANSLOCATION | BND | chr1 | 185962512 | chr1 | 185962596 | HMCN1 | INTRON:11 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 318,1 | 522,8 | MantaBND:7767:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:7767:0:0:0:0:0:0 | TRANSLOCATION | BND | chr1 | 185962587 | chr1 | 185962521 | HMCN1 | EXON:12 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 318,1 | 522,8 | MantaBND:7767:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:66808:66808:6:2:0:0 | TRANSLOCATION | BND | chr2 | 58193301 | chr2 | 58193471 | FANCL | INTRON:7 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 373,2 | 622,5 | MantaBND:0:66808:66808:6:2:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:66808:66808:6:2:0:1 | TRANSLOCATION | BND | chr2 | 58193466 | chr2 | 58193306 | FANCL | INTRON:7 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 373,2 | 622,5 | MantaBND:0:66808:66808:6:2:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:67862:67862:18:1:0 | DELETION | DEL | chr2 | 113217910 | chr2 | 113218025 | PAX8 | EXON:12 | . | PAX8-AS1 | GENE | . | . | PASS | -115 | no | . | 783,0 | 2572,30 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:69037:69037:1:0:0:0 | TRANSLOCATION | BND | chr2 | 186827751 | chr2 | 186827833 | ZSWIM2 | EXON:9 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 36,2 | 64,2 | MantaBND:0:69037:69037:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:69037:69037:1:0:0:1 | TRANSLOCATION | BND | chr2 | 186827829 | chr2 | 186827755 | ZSWIM2 | EXON:9 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 36,2 | 64,2 | MantaBND:0:69037:69037:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:69290:69290:27:1:0:1 | TRANSLOCATION | BND | chr2 | 197420214 | chr2 | 197420331 | SF3B1 | INTRON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 444,2 | 849,2 | MantaBND:0:69290:69290:27:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:69290:69290:27:1:0:0 | TRANSLOCATION | BND | chr2 | 197420324 | chr2 | 197420221 | SF3B1 | INTRON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 444,2 | 849,2 | MantaBND:0:69290:69290:27:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:61339:61339:13:0:0 | DELETION | DEL | chr3 | 12585081 | chr3 | 12585392 | RAF1 | INTRON:16 | . | MKRN2 | EXON:8 | . | . | MinSomaticScore | -311 | no | . | 1390,32 | 2021,15 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:6160:0:0:0:0:0:0 | TRANSLOCATION | BND | chr3 | 142459049 | chr3 | 142459216 | ATR | EXON:44 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 258,2 | 437,3 | MantaBND:6160:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:6160:0:0:0:0:0:1 | TRANSLOCATION | BND | chr3 | 142459207 | chr3 | 142459058 | ATR | INTRON:43 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 258,2 | 437,3 | MantaBND:6160:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDUP:TANDEM:0:65539:65539:3:0:0 | DUPLICATION | DUP | chr3 | 195785064 | chr3 | 195786608 | MUC4 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | 1544 | yes | . | 53,6 | . | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:38815:38815:0:0:0:0 | TRANSLOCATION | BND | chr4 | 85707 | chr4 | 85871 | ZNF595 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 160,6 | . | MantaBND:0:38815:38815:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:38815:38815:0:0:0:1 | TRANSLOCATION | BND | chr4 | 85871 | chr4 | 85707 | ZNF595 | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 160,6 | . | MantaBND:0:38815:38815:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:60242:60242:1:0:0:0 | TRANSLOCATION | BND | chr4 | 122226692 | chr4 | 122226790 | KIAA1109 | INTRON:23 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 115,1 | 215,8 | MantaBND:0:60242:60242:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:60242:60242:1:0:0:1 | TRANSLOCATION | BND | chr4 | 122226783 | chr4 | 122226699 | KIAA1109 | EXON:24 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 115,1 | 215,8 | MantaBND:0:60242:60242:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:5554:0:0:0:1:0:0 | TRANSLOCATION | BND | chr4 | 142077700 | chr4 | 142077818 | INPP4B | INTRON:25 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 86,2 | 193,2 | MantaBND:5554:0:0:0:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:5554:0:0:0:1:0:1 | TRANSLOCATION | BND | chr4 | 142077811 | chr4 | 142077707 | INPP4B | INTRON:25 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 86,2 | 193,2 | MantaBND:5554:0:0:0:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:5562:0:0:3:0:0:0 | TRANSLOCATION | BND | chr4 | 142375709 | chr4 | 142375823 | INPP4B | INTRON:7 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 127,2 | 211,2 | MantaBND:5562:0:0:3:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:5562:0:0:3:0:0:1 | TRANSLOCATION | BND | chr4 | 142375817 | chr4 | 142375715 | INPP4B | INTRON:7 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 127,2 | 211,2 | MantaBND:5562:0:0:3:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:5642:0:0:0:1:0:1 | TRANSLOCATION | BND | chr4 | 165333354 | chr4 | 165333459 | MSMO1 | INTRON:2 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 336,3 | 546,4 | MantaBND:5642:0:0:0:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:5642:0:0:0:1:0:0 | TRANSLOCATION | BND | chr4 | 165333452 | chr4 | 165333361 | MSMO1 | EXON:2 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 336,3 | 546,4 | MantaBND:5642:0:0:0:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4732:0:0:1:0:0:0 | TRANSLOCATION | BND | chr5 | 87379612 | chr5 | 87379719 | CCNH&RASA1 | INTRON:18 | + | RASA1 | INTRON:18 | - | . | MinSomaticScore | 0 | no | . | 131,2 | 213,3 | MantaBND:4732:0:0:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4732:0:0:1:0:0:1 | TRANSLOCATION | BND | chr5 | 87379712 | chr5 | 87379619 | CCNH&RASA1 | INTRON:18 | + | RASA1 | INTRON:18 | - | . | MinSomaticScore | 0 | no | . | 131,2 | 213,3 | MantaBND:4732:0:0:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:50154:50154:22:1:0 | DELETION | DEL | chr6 | 1611569 | chr6 | 1611782 | FOXC1 | EXON:1 | . | FOXCUT | INTERGENIC | . | . | MinSomaticScore | -213 | no | . | 1463,0 | 944,27 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4070:0:0:1:0:0:0 | TRANSLOCATION | BND | chr6 | 63720831 | chr6 | 63720956 | EYS&PHF3 | EXON:44 | + | EYS | EXON:44 | - | . | MinSomaticScore | 0 | no | . | 137,3 | 261,3 | MantaBND:4070:0:0:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4070:0:0:1:0:0:1 | TRANSLOCATION | BND | chr6 | 63720948 | chr6 | 63720839 | EYS&PHF3 | EXON:44 | + | EYS | EXON:44 | - | . | MinSomaticScore | 0 | no | . | 137,3 | 261,3 | MantaBND:4070:0:0:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4192:0:0:2:0:0:1 | TRANSLOCATION | BND | chr6 | 100798624 | chr6 | 100798848 | ASCC3 | INTRON:8 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 73,2 | 75,3 | MantaBND:4192:0:0:2:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4192:0:0:2:0:0:0 | TRANSLOCATION | BND | chr6 | 100798842 | chr6 | 100798630 | ASCC3 | INTRON:7 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 73,2 | 75,3 | MantaBND:4192:0:0:2:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4206:0:0:0:0:0:1 | TRANSLOCATION | BND | chr6 | 109146984 | chr6 | 109147112 | CEP57L1 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 35,2 | 54,2 | MantaBND:4206:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:4206:0:0:0:0:0:0 | TRANSLOCATION | BND | chr6 | 109147103 | chr6 | 109146993 | CEP57L1 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 35,2 | 54,2 | MantaBND:4206:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:53766:53766:3:3:0 | DELETION | DEL | chr6 | 134317840 | chr6 | 134318011 | SGK1 | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -171 | no | . | 978,0 | 2230,8 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:47640:47640:2:1:0:0 | TRANSLOCATION | BND | chr7 | 87173522 | chr7 | 87173654 | DMTF1 | INTRON:5 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 373,2 | 661,4 | MantaBND:0:47640:47640:2:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:47640:47640:2:1:0:1 | TRANSLOCATION | BND | chr7 | 87173646 | chr7 | 87173530 | DMTF1 | EXON:6 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 373,2 | 661,4 | MantaBND:0:47640:47640:2:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:3677:0:0:0:1:0:1 | TRANSLOCATION | BND | chr7 | 92213286 | chr7 | 92213440 | ENSG00000285953&KRIT1 | EXON:17 | + | KRIT1 | EXON:17 | - | . | MinSomaticScore | 0 | no | . | 191,2 | 369,4 | MantaBND:3677:0:0:0:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:3677:0:0:0:1:0:0 | TRANSLOCATION | BND | chr7 | 92213434 | chr7 | 92213292 | ENSG00000285953&KRIT1 | INTRON:16 | + | KRIT1 | INTRON:16 | - | . | MinSomaticScore | 0 | no | . | 191,2 | 369,4 | MantaBND:3677:0:0:0:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:49526:49526:8:0:0:1 | TRANSLOCATION | BND | chr7 | 140809093 | chr7 | 140809282 | BRAF | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 216,3 | 307,3 | MantaBND:0:49526:49526:8:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:49526:49526:8:0:0:0 | TRANSLOCATION | BND | chr7 | 140809277 | chr7 | 140809098 | BRAF | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 216,3 | 307,3 | MantaBND:0:49526:49526:8:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:8555:0:0:2:1:0:0 | TRANSLOCATION | BND | chr8 | 67227227 | chr8 | 67227307 | ARFGEF1 | EXON:27 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 133,1 | 218,6 | MantaBND:8555:0:0:2:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:8555:0:0:2:1:0:1 | TRANSLOCATION | BND | chr8 | 67227303 | chr8 | 67227231 | ARFGEF1 | EXON:27 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 133,1 | 218,6 | MantaBND:8555:0:0:2:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:84629:84629:1:0:0 | DELETION | DEL | chr8 | 116874143 | chr8 | 116874414 | RAD21-AS1 | INTERGENIC | . | MIR3610 | INTERGENIC | . | . | MinSomaticScore | -271 | no | . | 2908,0 | 4610,35 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:79016:79016:1:0:0:0 | TRANSLOCATION | BND | chr9 | 5077406 | chr9 | 5077530 | JAK2 | INTRON:14 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 305,2 | 568,2 | MantaBND:0:79016:79016:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:79016:79016:1:0:0:1 | TRANSLOCATION | BND | chr9 | 5077519 | chr9 | 5077417 | JAK2 | EXON:15 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 305,2 | 568,2 | MantaBND:0:79016:79016:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:79312:79312:0:0:0:1 | TRANSLOCATION | BND | chr9 | 21901283 | chr9 | 21901397 | MTAP | INTRON:7 | + | ENSG00000264545&MTAP | INTRON:7 | - | . | MinSomaticScore | 0 | no | . | 200,2 | 415,5 | MantaBND:0:79312:79312:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:79312:79312:0:0:0:0 | TRANSLOCATION | BND | chr9 | 21901392 | chr9 | 21901288 | MTAP | INTRON:7 | + | ENSG00000264545&MTAP | INTRON:7 | - | . | MinSomaticScore | 0 | no | . | 200,2 | 415,5 | MantaBND:0:79312:79312:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:8206:0:0:1:0:0:1 | TRANSLOCATION | BND | chr9 | 101286067 | chr9 | 101286190 | PLPPR1 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 73,2 | 147,4 | MantaBND:8206:0:0:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:8206:0:0:1:0:0:0 | TRANSLOCATION | BND | chr9 | 101286185 | chr9 | 101286072 | PLPPR1 | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 73,2 | 147,4 | MantaBND:8206:0:0:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:81133:81133:19:1:0 | DELETION | DEL | chr9 | 127790255 | chr9 | 127790572 | CDK9 | EXON:7 | . | MIR3960 | INTERGENIC | . | . | MinSomaticScore | -317 | no | . | 1618,39 | 2297,35 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:15370:15370:43:1:0:0 | TRANSLOCATION | BND | chr10 | 32011585 | chr10 | 32011776 | KIF5B | INTRON:25 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 243,15 | 350,5 | MantaBND:0:15370:15370:43:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:15370:15370:43:1:0:1 | TRANSLOCATION | BND | chr10 | 32011767 | chr10 | 32011594 | KIF5B | INTRON:25 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 243,15 | 350,5 | MantaBND:0:15370:15370:43:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:16398:16398:3:0:0:1 | TRANSLOCATION | BND | chr10 | 87931257 | chr10 | 87931394 | PTEN | INTRON:5 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 46,5 | 54,1 | MantaBND:0:16398:16398:3:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:16398:16398:3:0:0:0 | TRANSLOCATION | BND | chr10 | 87931389 | chr10 | 87931262 | PTEN | INTRON:5 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 46,5 | 54,1 | MantaBND:0:16398:16398:3:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:11229:11229:6:0:0:0 | TRANSLOCATION | BND | chr11 | 32614386 | chr11 | 32614535 | CCDC73 | EXON:16 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 256,3 | 391,7 | MantaBND:0:11229:11229:6:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:11229:11229:6:0:0:1 | TRANSLOCATION | BND | chr11 | 32614528 | chr11 | 32614393 | CCDC73 | EXON:16 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 256,3 | 391,7 | MantaBND:0:11229:11229:6:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:11444:11444:3:0:0:0 | TRANSLOCATION | BND | chr11 | 48366404 | chr11 | 48366540 | OR4C5 | EXON:1 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 452,2 | 904,2 | MantaBND:0:11444:11444:3:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:11444:11444:3:0:0:1 | TRANSLOCATION | BND | chr11 | 48366536 | chr11 | 48366408 | OR4C5 | GENE | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 452,2 | 904,2 | MantaBND:0:11444:11444:3:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:13518:13518:2:0:0:0 | TRANSLOCATION | BND | chr11 | 76526485 | chr11 | 76526668 | EMSY | EXON:13 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 918,3 | 1494,7 | MantaBND:0:13518:13518:2:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:13518:13518:2:0:0:1 | TRANSLOCATION | BND | chr11 | 76526663 | chr11 | 76526490 | EMSY | INTRON:13 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 918,3 | 1494,7 | MantaBND:0:13518:13518:2:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:13910:13910:0:0:0:0 | TRANSLOCATION | BND | chr11 | 107454542 | chr11 | 107454648 | CWF19L2 | EXON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 125,2 | 222,4 | MantaBND:0:13910:13910:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:13910:13910:0:0:0:1 | TRANSLOCATION | BND | chr11 | 107454640 | chr11 | 107454550 | CWF19L2 | INTRON:2 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 125,2 | 222,4 | MantaBND:0:13910:13910:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:6946:6946:41:2:0:0 | TRANSLOCATION | BND | chr12 | 50355073 | chr12 | 50355283 | FAM186A | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 699,2 | 1088,3 | MantaBND:0:6946:6946:41:2:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:6946:6946:41:2:0:1 | TRANSLOCATION | BND | chr12 | 50355278 | chr12 | 50355078 | FAM186A | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 699,2 | 1088,3 | MantaBND:0:6946:6946:41:2:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:8207:8207:8:7:0:1 | TRANSLOCATION | BND | chr12 | 68843216 | chr12 | 68843803 | CPM&MDM2 | GENE | + | ENSG00000257181&MDM2 | EXON:1 | - | . | PASS | 0 | no | . | 1273,8 | 1705,34 | MantaBND:0:8207:8207:8:7:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:8207:8207:8:7:0:0 | TRANSLOCATION | BND | chr12 | 68843788 | chr12 | 68843231 | CPM&MDM2 | GENE | + | ENSG00000257181&MDM2 | GENE | - | . | PASS | 0 | no | . | 1273,8 | 1705,34 | MantaBND:0:8207:8207:8:7:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:916:0:0:1:0:0:1 | TRANSLOCATION | BND | chr12 | 98544405 | chr12 | 98544545 | TMPO | GENE | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 227,2 | 349,3 | MantaBND:916:0:0:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:916:0:0:1:0:0:0 | TRANSLOCATION | BND | chr12 | 98544538 | chr12 | 98544412 | TMPO | GENE | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 227,2 | 349,3 | MantaBND:916:0:0:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:9874:9874:1:9:0 | DELETION | DEL | chr12 | 132644694 | chr12 | 132645297 | POLE | INTRON:32 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -603 | no | . | 875,21 | 1260,46 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:2397:0:0:1:2:0:0 | TRANSLOCATION | BND | chr15 | 43491908 | chr15 | 43492028 | TP53BP1 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 934,2 | 1587,3 | MantaBND:2397:0:0:1:2:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:2397:0:0:1:2:0:1 | TRANSLOCATION | BND | chr15 | 43492023 | chr15 | 43491913 | TP53BP1 | EXON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 934,2 | 1587,3 | MantaBND:2397:0:0:1:2:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:30236:30236:15:0:0 | DELETION | DEL | chr15 | 88103303 | chr15 | 88103477 | NTRK3 | INTRON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -174 | no | . | 1227,0 | 2990,23 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaINS:0:23928:23928:16:2:0 | INSERTION | INS | chr16 | 696754 | chr16 | 696754 | ENSG00000261659 | INTERGENIC | . | FBXL16 | INTRON:3 | . | . | MinSomaticScore | 106 | no | . | 2,0 | 494,37 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:24171:24171:10:1:0 | DELETION | DEL | chr16 | 2057761 | chr16 | 2058082 | TSC2 | INTRON:9 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -321 | no | . | 716,26 | 2001,74 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:24525:24525:0:1:0 | DELETION | DEL | chr16 | 3879939 | chr16 | 3880225 | CREBBP | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | -286 | no | . | 1962,3 | 3554,17 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:2253:0:0:3:0:0:0 | TRANSLOCATION | BND | chr16 | 58580643 | chr16 | 58580776 | CNOT1 | EXON:12 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 228,2 | 401,4 | MantaBND:2253:0:0:3:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:2253:0:0:3:0:0:1 | TRANSLOCATION | BND | chr16 | 58580771 | chr16 | 58580648 | CNOT1 | INTRON:11 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 228,2 | 401,4 | MantaBND:2253:0:0:3:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:20027:20027:0:1:0 | DELETION | DEL | chr17 | 35099838 | chr17 | 35100662 | Vault | INTERGENIC | . | RAD51D | INTERGENIC | . | . | MinSomaticScore | -824 | no | . | 2544,6 | 3299,8 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:20352:20352:28:0:0 | DELETION | DEL | chr17 | 39725346 | chr17 | 39725445 | ERBB2 | EXON:22 | . | MIR4728 | INTERGENIC | . | . | PASS | -99 | no | . | 762,0 | 2404,11 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:21045:21045:46:2:0:0 | TRANSLOCATION | BND | chr17 | 43051285 | chr17 | 43051386 | BRCA1 | INTRON:20 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 1595,2 | 3213,2 | MantaBND:0:21045:21045:46:2:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:21045:21045:46:2:0:1 | TRANSLOCATION | BND | chr17 | 43051380 | chr17 | 43051291 | BRCA1 | INTRON:20 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 1595,2 | 3213,2 | MantaBND:0:21045:21045:46:2:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:22169:22169:42:3:0:1 | TRANSLOCATION | BND | chr17 | 59950418 | chr17 | 59950511 | ENSG00000267318&RPS6KB1 | EXON:15 | + | RPS6KB1 | EXON:15 | - | . | MinSomaticScore | 0 | no | . | 357,3 | 586,5 | MantaBND:0:22169:22169:42:3:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:22169:22169:42:3:0:0 | TRANSLOCATION | BND | chr17 | 59950509 | chr17 | 59950420 | ENSG00000267318&RPS6KB1 | EXON:15 | + | RPS6KB1 | EXON:15 | - | . | MinSomaticScore | 0 | no | . | 357,3 | 586,5 | MantaBND:0:22169:22169:42:3:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:23053:23053:10:1:1 | DELETION | DEL | chr17 | 76736752 | chr17 | 76737447 | SRSF2 | EXON:1 | . | MFSD11&SRSF2 | GENE | . | . | MinSomaticScore | -695 | no | . | 1837,19 | 2087,43 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:40073:40073:19:0:0:0 | TRANSLOCATION | BND | chr18 | 42080914 | chr18 | 42081082 | PIK3C3 | INTRON:24 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 143,2 | 207,2 | MantaBND:0:40073:40073:19:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:40073:40073:19:0:0:1 | TRANSLOCATION | BND | chr18 | 42081075 | chr18 | 42080921 | PIK3C3 | INTRON:24 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 143,2 | 207,2 | MantaBND:0:40073:40073:19:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:3070:0:0:1:0:0:1 | TRANSLOCATION | BND | chr18 | 68874806 | chr18 | 68874883 | CCDC102B | INTRON:5 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 28,1 | 37,8 | MantaBND:3070:0:0:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:3070:0:0:1:0:0:0 | TRANSLOCATION | BND | chr18 | 68874879 | chr18 | 68874810 | CCDC102B | INTRON:5 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 28,1 | 37,8 | MantaBND:3070:0:0:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:36692:36692:2:2:0 | DELETION | DEL | chr19 | 39178664 | chr19 | 39178794 | PAK4 | EXON:9 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -130 | no | . | 1278,0 | 3614,16 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:38640:38640:20:0:0 | DELETION | DEL | chr19 | 50669033 | chr19 | 50669111 | SHANK1 | EXON:24 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -78 | no | . | 175,0 | 684,33 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:39359:39359:8:2:0 | DELETION | DEL | chr19 | 56621857 | chr19 | 56622529 | ZNF71 | EXON:4 | . | ZIM2-AS1 | EXON:2 | . | . | PASS | -672 | no | . | 654,21 | 1187,11 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:40942:40942:21:1:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890577 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -288 | no | . | 480,6 | 328,41 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:67:0:0:0:0:0:1 | TRANSLOCATION | BND | chrX | 36014838 | chrX | 36014959 | CFAP47 | EXON:22 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 93,3 | 181,14 | MantaBND:67:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:67:0:0:0:0:0:0 | TRANSLOCATION | BND | chrX | 36014954 | chrX | 36014843 | CFAP47 | INTRON:22 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 93,3 | 181,14 | MantaBND:67:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:2166:2166:12:1:0 | DELETION | DEL | chrX | 76428374 | chrX | 76428950 | MAGEE1 | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | -576 | no | . | 1257,42 | 1868,9 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:2179:2179:5:1:0:1 | TRANSLOCATION | BND | chrX | 77520629 | chrX | 77520743 | ATRX | INTRON:34 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 276,3 | 485,8 | MantaBND:0:2179:2179:5:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:2179:2179:5:1:0:0 | TRANSLOCATION | BND | chrX | 77520737 | chrX | 77520635 | ATRX | INTRON:34 | + | INTERGENIC | INTERGENIC | - | . | PASS | 0 | no | . | 276,3 | 485,8 | MantaBND:0:2179:2179:5:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:2180:2180:13:1:0:0 | TRANSLOCATION | BND | chrX | 77523112 | chrX | 77523262 | ATRX | INTRON:31 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 232,2 | 458,2 | MantaBND:0:2180:2180:13:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:2180:2180:13:1:0:1 | TRANSLOCATION | BND | chrX | 77523257 | chrX | 77523117 | ATRX | EXON:31 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 232,2 | 458,2 | MantaBND:0:2180:2180:13:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:148:0:0:0:0:0:1 | TRANSLOCATION | BND | chrX | 84097872 | chrX | 84098002 | RPS6KA6 | INTRON:18 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 50,2 | 73,3 | MantaBND:148:0:0:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:148:0:0:0:0:0:0 | TRANSLOCATION | BND | chrX | 84097997 | chrX | 84097877 | RPS6KA6 | INTRON:18 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 50,2 | 73,3 | MantaBND:148:0:0:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:2357:2357:3:2:0 | DELETION | DEL | chrX | 85107883 | chrX | 85108609 | SATL1 | EXON:3 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -726 | no | . | 1484,17 | 1943,22 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:2624:2624:1:1:0:0 | TRANSLOCATION | BND | chrX | 106773049 | chrX | 106773199 | RNF128 | EXON:2 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 180,2 | 270,4 | MantaBND:0:2624:2624:1:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaBND:0:2624:2624:1:1:0:1 | TRANSLOCATION | BND | chrX | 106773190 | chrX | 106773058 | RNF128 | INTRON:2 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 180,2 | 270,4 | MantaBND:0:2624:2624:1:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_1 | MantaDEL:0:3030:3030:19:0:0 | DELETION | DEL | chrX | 123912904 | chrX | 123913039 | XIAP | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -135 | no | . | 135,0 | 596,25 |
112 rows