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- Filename
- 869_VZQ-T1-TDNA-1_A23WGJTLT4_2_vs_869_VZQ-N1-BDNA-1_A23FG3YLT4_1.sv.hmnz.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/869_VZQ-T1-TDNA-1_A23WGJTLT4_2_vs_869_VZQ-N1-BDNA-1_A23FG3YLT4_1/variants/dna_fusions/869_VZQ-T1-TDNA-1_A23WGJTLT4_2_vs_869_VZQ-N1-BDNA-1_A23FG3YLT4_1.sv.hmnz.tsv
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- Workflow Run
- hmnz-cgp-dna-exp0034-20260606-020246
- Published
- Jun 05, 2026 7:05 PM
Content
View in new tab| sample | sv_id | sv_type | svtype_standard | chr1 | pos1 | chr2 | pos2 | gene1 | region1 | strand1 | gene2 | region2 | strand2 | qual | filter | svlen | imprecise | tumor_gt | tumor_pr | tumor_sr | mate_id |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:55283:55283:0:0:0 | DELETION | DEL | chr1 | 51840327 | chr1 | 51840378 | NRDC | EXON:2 | . | MIR761 | INTERGENIC | . | . | MinSomaticScore | -51 | no | . | 61,0 | 325,14 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:56500:56500:7:0:0 | DELETION | DEL | chr1 | 150472405 | chr1 | 150472575 | RPRD2 | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -170 | no | . | 443,0 | 986,9 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:56632:56632:26:0:0 | DELETION | DEL | chr1 | 152354960 | chr1 | 152355191 | FLG2 | EXON:3 | . | FLG-AS1 | EXON:3 | . | . | PASS | -231 | no | . | 995,0 | 1237,108 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:57095:57095:7:0:0 | DELETION | DEL | chr1 | 156866439 | chr1 | 156866547 | NTRK1 | INTRON:3 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -108 | no | . | 1091,0 | 3496,18 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:58546:58546:0:2:0 | INSERTION | INS | chr1 | 209762730 | chr1 | 209762731 | TRAF3IP3 | INTRON | . | INTERGENIC | INTERGENIC | . | . | PASS | 0 | no | . | 3,0 | 352,19 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:50682:50682:10:0:0 | DELETION | DEL | chr2 | 113217910 | chr2 | 113218025 | PAX8 | EXON:12 | . | PAX8-AS1 | GENE | . | . | MinSomaticScore | -115 | no | . | 1397,0 | 4180,12 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:51566:51571:0:0:0 | DELETION | DEL | chr2 | 178432401 | chr2 | 178447270 | PRKRA | INTRON:7 | . | CHROMR&PRKRA | GENE | . | . | PASS | -14869 | yes | . | 104,20 | . | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:52018:52018:9:0:0 | DELETION | DEL | chr2 | 197419862 | chr2 | 197420011 | SF3B1 | INTRON:4 | . | INTERGENIC | INTERGENIC | . | . | PASS | -149 | no | . | 1450,0 | 3708,15 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:52946:52946:0:1:0 | INSERTION | INS | chr2 | 240869074 | chr2 | 240869074 | AGXT | INTRON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | 74 | no | . | 4,0 | 262,53 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:43265:43265:0:1:0 | DELETION | DEL | chr4 | 1394865 | chr4 | 1394930 | UVSSA | GENE | . | INTERGENIC | INTERGENIC | . | . | PASS | -65 | no | . | 197,0 | 1172,33 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:44910:44910:0:0:0 | INSERTION | INS | chr4 | 151280054 | chr4 | 151280054 | ENSG00000250350 | INTERGENIC | . | PRSS48 | INTRON:2 | . | . | PASS | 56 | no | . | 0,0 | 66,21 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:1503:0:0:0:0:0 | DELETION | DEL | chr5 | 492176 | chr5 | 492236 | SLC9A3 | INTRON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | -60 | no | . | 43,0 | 121,18 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:41885:41885:1:1:0 | DUPLICATION | DUP | chr5 | 96896864 | chr5 | 96896964 | ENSG00000247121 | EXON:1 | . | ERAP2 | GENE | . | . | MinSomaticScore | 100 | no | . | 158,0 | 295,6 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:37092:37092:4:2:0 | DELETION | DEL | chr6 | 1611782 | chr6 | 1611907 | FOXC1 | EXON:1 | . | FOXCUT | INTERGENIC | . | . | MinSomaticScore | -125 | no | . | 1329,0 | 2989,17 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:39219:39219:20:1:0 | DELETION | DEL | chr6 | 41941809 | chr6 | 41941884 | CCND3 | INTERGENIC | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -75 | no | . | 528,0 | 889,9 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:40544:40544:8:1:0 | DELETION | DEL | chr6 | 152125430 | chr6 | 152125975 | SYNE1 | INTRON:145 | . | ESR1 | GENE | . | . | MinSomaticScore | -545 | no | . | 2631,49 | 3360,20 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:62349:62349:2:0:1 | DELETION | DEL | chr8 | 10538504 | chr8 | 10538714 | PRSS55 | EXON:5 | . | PRSS51 | GENE | . | . | PASS | -210 | no | . | 443,0 | 986,12 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:62392:62392:13:1:0 | DELETION | DEL | chr8 | 11758538 | chr8 | 11758841 | GATA4 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | -303 | no | . | 2371,52 | 3789,17 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:61309:61309:18:0:0 | DELETION | DEL | chr9 | 127790255 | chr9 | 127790572 | CDK9 | EXON:7 | . | MIR3960 | INTERGENIC | . | . | PASS | -317 | no | . | 2711,70 | 3738,47 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:61939:61939:40:2:0 | DELETION | DEL | chr9 | 136507361 | chr9 | 136507992 | NOTCH1 | EXON:22 | . | INTERGENIC | INTERGENIC | . | . | PASS | -631 | no | . | 2435,50 | 3087,10 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:12683:12683:0:3:0 | DELETION | DEL | chr10 | 128103089 | chr10 | 128103806 | MKI67 | EXON:13 | . | INTERGENIC | INTERGENIC | . | . | PASS | -717 | no | . | 474,19 | 606,23 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:523:0:0:0:0:0 | DELETION | DEL | chr10 | 132140569 | chr10 | 132140647 | JAKMIP3 | INTRON:10 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -78 | no | . | 52,0 | 190,37 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:6876:6876:1:0:0 | DELETION | DEL | chr11 | 1088600 | chr11 | 1088891 | MUC2 | INTRON:23 | . | INTERGENIC | INTERGENIC | . | . | PASS | -291 | no | . | 94,3 | 148,45 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:6899:6899:52:7:0 | DELETION | DEL | chr11 | 1189674 | chr11 | 1190424 | MUC5AC | EXON:31 | . | INTERGENIC | INTERGENIC | . | . | PASS | -750 | no | . | 1975,21 | 1960,9 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9970:9970:5:0:0 | DELETION | DEL | chr11 | 118488676 | chr11 | 118488792 | KMT2A | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -116 | no | . | 616,0 | 1729,16 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9996:9996:5:0:0 | DELETION | DEL | chr11 | 128812821 | chr11 | 128813515 | FLI1 | EXON:9 | . | FLI1-KCNJ1 | INTERGENIC | . | . | PASS | -694 | no | . | 1392,109 | 2014,156 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:3656:3656:2:0:0 | DELETION | DEL | chr12 | 990013 | chr12 | 990121 | ENSG00000250132&RAD52 | GENE | . | ENSG00000250132 | EXON:1 | . | . | PASS | -108 | no | . | 795,0 | 2143,16 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:4621:4621:11:1:0 | DELETION | DEL | chr12 | 49051788 | chr12 | 49052292 | KMT2D | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | PASS | -504 | no | . | 3118,126 | 3853,21 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:237:0:0:0:0:0 | DELETION | DEL | chr12 | 101920282 | chr12 | 101920384 | ENSG00000257202 | INTERGENIC | . | DRAM1 | INTRON:6 | . | . | PASS | -102 | no | . | 30,0 | 49,10 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:3489:3489:11:2:0 | DUPLICATION | DUP | chr13 | 113403860 | chr13 | 113404103 | ADPRHL1 | EXON:8 | . | INTERGENIC | INTERGENIC | . | . | PASS | 243 | no | . | 935,5 | 1232,72 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:3489:3489:9:3:0 | DUPLICATION | DUP | chr13 | 113403869 | chr13 | 113404024 | ADPRHL1 | EXON:8 | . | INTERGENIC | INTERGENIC | . | . | PASS | 155 | no | . | 467,0 | 1730,50 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:3489:3489:10:0:0 | DUPLICATION | DUP | chr13 | 113403869 | chr13 | 113404311 | ADPRHL1 | EXON:8 | . | INTERGENIC | INTERGENIC | . | . | PASS | 442 | no | . | 1123,3 | 1753,47 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:24268:24268:3:0:0 | DELETION | DEL | chr14 | 104769485 | chr14 | 104769785 | ENSG00000258430 | EXON:2 | . | AKT1 | EXON:15 | . | . | PASS | -300 | no | . | 2659,20 | 3785,17 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:23899:23899:77:0:0 | DELETION | DEL | chr14 | 104948753 | chr14 | 104951537 | AHNAK2 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | -2784 | yes | . | 219,25 | . | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:17164:17164:8:0:0 | INSERTION | INS | chr16 | 285937 | chr16 | 285937 | ARHGDIG | INTERGENIC | . | AXIN1 | INTERGENIC | . | . | PASS | 127 | no | . | 0,0 | 60,48 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:17318:17318:1:0:0 | DELETION | DEL | chr16 | 1450687 | chr16 | 1450925 | ENSG00000260051 | INTERGENIC | . | ENSG00000261641 | INTERGENIC | . | . | PASS | -238 | no | . | 144,0 | 241,55 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:527:0:0:0:0:0 | INSERTION | INS | chr17 | 864137 | chr17 | 864137 | NXN | INTRON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | 121 | no | . | 0,0 | 143,42 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:14815:14815:1:4:0 | INSERTION | INS | chr17 | 40818851 | chr17 | 40818851 | KRT10 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | 90 | no | . | 6,0 | 537,243 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:14815:14815:9:5:0 | DUPLICATION | DUP | chr17 | 40818851 | chr17 | 40818905 | KRT10 | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | 54 | no | . | 957,16 | 1258,34 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:14878:14879:1:0:0 | DELETION | DEL | chr17 | 41238509 | chr17 | 41250279 | KRTAP9-4&KRTAP9-8 | GENE | . | KRTAP9-4 | EXON:1 | . | . | MinSomaticScore | -11770 | yes | . | 482,21 | . | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:17114:17114:1:1:0 | DELETION | DEL | chr17 | 82750804 | chr17 | 82751123 | FN3K | EXON:6 | . | TBCD | INTERGENIC | . | . | MinSomaticScore | -319 | no | . | 168,1 | 202,7 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:24459:24459:1:0:1 | INSERTION | INS | chr19 | 613590 | chr19 | 613590 | POLRMT | INTERGENIC | . | HCN2 | INTRON:6 | . | . | MinSomaticScore | 96 | no | . | 0,0 | 90,23 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:24462:24462:0:0:0 | DELETION | DEL | chr19 | 620925 | chr19 | 620987 | HCN2 | INTERGENIC | . | POLRMT | INTRON:10 | . | . | PASS | -62 | no | . | 36,0 | 191,20 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:25466:25466:18:3:0 | DELETION | DEL | chr19 | 8938375 | chr19 | 8939050 | MUC16 | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | PASS | -675 | no | . | 1835,61 | 2842,13 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:26050:26051:0:0:0:0 | TRANSLOCATION | BND | chr19 | 14397561 | chr19 | 14765906 | ADGRE2&ADGRE5 | INTRON:6 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 350,10 | . | MantaBND:0:26050:26051:0:0:0:1 |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:26050:26051:1:0:0:1 | TRANSLOCATION | BND | chr19 | 14397923 | chr19 | 14765442 | ADGRE2&ADGRE5 | EXON:8 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 473,40 | . | MantaBND:0:26050:26051:1:0:0:0 |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:26050:26051:1:0:0:0 | TRANSLOCATION | BND | chr19 | 14765442 | chr19 | 14397923 | ADGRE2&ADGRE5 | INTRON:8 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 473,40 | . | MantaBND:0:26050:26051:1:0:0:1 |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:26050:26051:0:0:0:1 | TRANSLOCATION | BND | chr19 | 14765906 | chr19 | 14397561 | ADGRE2&ADGRE5 | INTRON:6 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | yes | . | 350,10 | . | MantaBND:0:26050:26051:0:0:0:0 |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:26934:26934:2:0:0 | DELETION | DEL | chr19 | 35720571 | chr19 | 35721213 | KMT2B | EXON:3 | . | ZBTB32 | INTERGENIC | . | . | MinSomaticScore | -642 | no | . | 2754,37 | 3284,14 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDUP:TANDEM:0:27352:27353:0:0:0 | DUPLICATION | DUP | chr19 | 39878179 | chr19 | 39894124 | FCGBP | EXON:13 | . | INTERGENIC | INTERGENIC | . | . | PASS | 15945 | yes | . | 2288,43 | . | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:27660:27660:11:0:0 | DELETION | DEL | chr19 | 42273962 | chr19 | 42274142 | CIC | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | PASS | -180 | no | . | 1779,0 | 3657,23 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:28718:28718:5:0:0 | INSERTION | INS | chr19 | 51704885 | chr19 | 51704885 | SPACA6 | INTRON:8 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | 153 | no | . | 0,0 | 22,11 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaINS:0:33245:33245:49:0:0 | INSERTION | INS | chr20 | 63566679 | chr20 | 63566679 | HELZ2 | INTRON:6 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | 122 | no | . | 0,0 | 132,10 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:30590:30590:32:3:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890573 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -284 | no | . | 820,7 | 562,44 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:30591:30591:20:0:0 | DELETION | DEL | chr22 | 22894175 | chr22 | 22894662 | IGLC1 | INTERGENIC | . | IGLJ2 | INTERGENIC | . | . | MinSomaticScore | -487 | no | . | 2852,88 | 3100,39 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:486:486:16:2:0 | DELETION | DEL | chrX | 37010193 | chrX | 37010848 | FAM47C | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | PASS | -655 | no | . | 978,41 | 1799,13 | |
| 869_VZQ-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:506:506:18:1:0 | DELETION | DEL | chrX | 41344471 | chrX | 41345593 | DDX3X | INTRON:11 | . | DDX3X&RN7SL15P | GENE | . | . | MinSomaticScore | -1122 | no | . | 1019,4 | 1060,5 |
58 rows