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- Filename
- 1136_5BE-T1-TDNA-1_A23WGJTLT4_2_vs_1136_5BE-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- s3://natera-platform-sandbox/pipeline-outputs/aih_dev/altera_inhouse_dna/hmnz_cgp_dna_exp0034__70824045--20260606-020246/1136_5BE-T1-TDNA-1_A23WGJTLT4_2_vs_1136_5BE-N1-BDNA-1_A237CFYLT3_1/variants/dna_fusions/1136_5BE-T1-TDNA-1_A23WGJTLT4_2_vs_1136_5BE-N1-BDNA-1_A237CFYLT3_1.sv.hmnz.tsv
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- 9.9 KB
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- hmnz-cgp-dna-exp0034-20260606-020246
- Published
- Jun 05, 2026 7:05 PM
Content
View in new tab| sample | sv_id | sv_type | svtype_standard | chr1 | pos1 | chr2 | pos2 | gene1 | region1 | strand1 | gene2 | region2 | strand2 | qual | filter | svlen | imprecise | tumor_gt | tumor_pr | tumor_sr | mate_id |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:75024:75024:11:4:0 | DELETION | DEL | chr1 | 152219649 | chr1 | 152220357 | HRNR | EXON:3 | . | FLG-AS1 | GENE | . | . | PASS | -708 | no | . | 958,19 | 1357,5 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:65527:65527:8:1:0:1 | TRANSLOCATION | BND | chr2 | 39023116 | chr2 | 39023247 | SOS1 | EXON:10 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 758,3 | 1366,3 | MantaBND:0:65527:65527:8:1:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:65527:65527:8:1:0:0 | TRANSLOCATION | BND | chr2 | 39023237 | chr2 | 39023126 | SOS1 | INTRON:9 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 758,3 | 1366,3 | MantaBND:0:65527:65527:8:1:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:3866:0:0:3:0:0:1 | TRANSLOCATION | BND | chr2 | 55640674 | chr2 | 55640759 | PNPT1 | EXON:26 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 205,1 | 399,8 | MantaBND:3866:0:0:3:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:3866:0:0:3:0:0:0 | TRANSLOCATION | BND | chr2 | 55640751 | chr2 | 55640682 | PNPT1 | INTRON:25 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 205,1 | 399,8 | MantaBND:3866:0:0:3:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:69480:69480:0:0:0 | DELETION | DEL | chr2 | 226795365 | chr2 | 226795584 | IRS1 | EXON:1 | . | ENSG00000272622 | INTERGENIC | . | . | MinSomaticScore | -219 | no | . | 1672,0 | 2945,35 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:3533:1:1:0:2:0 | DELETION | DEL | chr3 | 71064962 | chr3 | 71065041 | FOXP1 | INTRON:2 | . | ENSG00000285708 | INTRON:12 | . | . | MinSomaticScore | -79 | no | . | 591,0 | 1996,20 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:58863:58863:0:0:0:1 | TRANSLOCATION | BND | chr4 | 118114350 | chr4 | 118114961 | NDST3 | INTRON:3 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 214,2 | 278,4 | MantaBND:0:58863:58863:0:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:58863:58863:0:0:0:0 | TRANSLOCATION | BND | chr4 | 118114955 | chr4 | 118114356 | NDST3 | EXON:4 | + | INTERGENIC | INTERGENIC | - | . | MinSomaticScore | 0 | no | . | 214,2 | 278,4 | MantaBND:0:58863:58863:0:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:55196:55196:1:0:0:0 | TRANSLOCATION | BND | chr5 | 129620607 | chr5 | 129620748 | ADAMTS19&ENSG00000251680 | INTRON:8 | + | ADAMTS19 | INTRON:8 | - | . | MinSomaticScore | 0 | no | . | 344,2 | 632,3 | MantaBND:0:55196:55196:1:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:55196:55196:1:0:0:1 | TRANSLOCATION | BND | chr5 | 129620739 | chr5 | 129620616 | ADAMTS19&ENSG00000251680 | EXON:9 | + | ADAMTS19 | EXON:9 | - | . | MinSomaticScore | 0 | no | . | 344,2 | 632,3 | MantaBND:0:55196:55196:1:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:55926:55926:17:0:0:0 | TRANSLOCATION | BND | chr5 | 149494453 | chr5 | 149494906 | CSNK1A1&ENSG00000230551 | EXON:2 | + | ENSG00000230551 | EXON:2 | - | . | MinSomaticScore | 0 | yes | . | 2560,2 | . | MantaBND:0:55926:55926:17:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:55926:55926:22:0:0:0 | TRANSLOCATION | BND | chr5 | 149494554 | chr5 | 149494733 | CSNK1A1&ENSG00000230551 | EXON:2 | + | ENSG00000230551 | EXON:2 | - | . | MinSomaticScore | 0 | no | . | 1743,3 | 3081,3 | MantaBND:0:55926:55926:22:0:0:1 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:55926:55926:22:0:0:1 | TRANSLOCATION | BND | chr5 | 149494729 | chr5 | 149494558 | CSNK1A1&ENSG00000230551 | EXON:2 | + | ENSG00000230551 | EXON:2 | - | . | MinSomaticScore | 0 | no | . | 1743,3 | 3081,3 | MantaBND:0:55926:55926:22:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:55926:55926:17:0:0:1 | TRANSLOCATION | BND | chr5 | 149494906 | chr5 | 149494453 | CSNK1A1&ENSG00000230551 | EXON:2 | + | ENSG00000230551 | EXON:2 | - | . | MinSomaticScore | 0 | yes | . | 2560,2 | . | MantaBND:0:55926:55926:17:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:49629:49629:5:0:0 | DELETION | DEL | chr6 | 31028280 | chr6 | 31028883 | MUC22 | EXON:2 | . | INTERGENIC | INTERGENIC | . | . | PASS | -603 | no | . | 1835,76 | 2866,59 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:50015:50016:2:0:0:1 | TRANSLOCATION | BND | chr6 | 32584107 | chr6_GL000251V2_ALT | 3939027 | HLA-DRB1 | GENE | - | INTERGENIC | INTERGENIC | + | . | PASS | 0 | yes | . | 1208,49 | . | MantaBND:0:50015:50016:2:0:0:0 |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:50166:50166:3:9:0 | DELETION | DEL | chr6 | 32758276 | chr6 | 32758958 | HLA-DQB2 | EXON:3 | . | INTERGENIC | INTERGENIC | . | . | PASS | -682 | no | . | 1220,38 | 1849,2 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:50624:50624:9:1:0 | DELETION | DEL | chr6 | 36721751 | chr6 | 36722378 | RAB44 | EXON:9 | . | INTERGENIC | INTERGENIC | . | . | PASS | -627 | no | . | 817,14 | 858,19 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:82552:82552:1:0:0 | DELETION | DEL | chr8 | 10607514 | chr8 | 10608102 | RP1L1 | EXON:4 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -588 | no | . | 870,55 | 1148,27 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:45677:45677:2:1:0 | DELETION | DEL | chr8 | 116874143 | chr8 | 116874414 | RAD21-AS1 | INTERGENIC | . | MIR3610 | INTERGENIC | . | . | PASS | -271 | no | . | 2882,0 | 4198,59 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:45677:45677:5:1:0 | DELETION | DEL | chr8 | 116874218 | chr8 | 116874412 | RAD21-AS1 | INTERGENIC | . | MIR3610 | INTERGENIC | . | . | PASS | -194 | no | . | 2418,0 | 4420,12 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:80593:80593:1:1:0 | DELETION | DEL | chr9 | 96818004 | chr9 | 96818592 | ZNF782 | EXON:6 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -588 | no | . | 724,28 | 919,9 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9599:9599:0:1:0 | DELETION | DEL | chr11 | 535326 | chr11 | 535493 | HRAS | EXON:1 | . | LRRC56 | INTERGENIC | . | . | PASS | -167 | no | . | 1054,0 | 2244,19 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9746:9746:45:4:1 | DELETION | DEL | chr11 | 1191660 | chr11 | 1191900 | MUC5AC | EXON:31 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -240 | no | . | 1169,0 | 1870,64 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9204:9204:189:4:0 | DELETION | DEL | chr11 | 1250349 | chr11 | 1251033 | MUC5B | EXON:31 | . | MUC5B-AS1 | INTERGENIC | . | . | PASS | -684 | no | . | 1502,37 | 2273,36 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9789:9789:3:1:0 | DELETION | DEL | chr11 | 1584426 | chr11 | 1585086 | KRTAP5-1 | EXON:1 | . | KRTAP5-AS1 | EXON:1 | . | . | PASS | -660 | no | . | 1079,15 | 1268,3 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9794:9794:1:8:0 | DELETION | DEL | chr11 | 1621710 | chr11 | 1621860 | KRTAP5-4 | EXON:1 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -150 | no | . | 917,0 | 1290,11 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:11520:11520:24:1:0 | DELETION | DEL | chr11 | 62522666 | chr11 | 62523272 | AHNAK | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -606 | no | . | 1451,49 | 2037,2 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:11767:11767:24:3:0 | DELETION | DEL | chr11 | 64368649 | chr11 | 64369365 | RPS6KA4 | INTRON:12 | . | MIR1237&RPS6KA4 | GENE | . | . | PASS | -716 | no | . | 1988,19 | 2283,9 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:6441:6441:6:0:0 | DELETION | DEL | chr12 | 40480858 | chr12 | 40484101 | MUC19 | EXON:56 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -3243 | yes | . | 517,20 | . | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:6557:6557:3:4:0 | DELETION | DEL | chr12 | 49050107 | chr12 | 49050937 | KMT2D | EXON:12 | . | INTERGENIC | INTERGENIC | . | . | PASS | -830 | no | . | 2960,16 | 4047,7 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:6557:6557:6:2:0 | DELETION | DEL | chr12 | 49051595 | chr12 | 49051784 | KMT2D | EXON:11 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -189 | no | . | 1558,0 | 4130,64 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:6690:6690:6:5:1 | DELETION | DEL | chr12 | 50352908 | chr12 | 50353556 | FAM186A | EXON:4 | . | INTERGENIC | INTERGENIC | . | . | PASS | -648 | no | . | 1582,45 | 2520,23 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:9359:9359:0:6:1 | DELETION | DEL | chr12 | 131918902 | chr12 | 131918973 | ULK1 | INTRON:23 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -71 | no | . | 15,0 | 49,28 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:4887:4887:0:9:0 | DELETION | DEL | chr13 | 110456830 | chr13 | 110457291 | COL4A2 | INTRON:20 | . | COL4A2-AS2 | EXON:5 | . | . | MinSomaticScore | -461 | no | . | 1797,91 | 3432,88 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:24953:24953:9:0:0 | DELETION | DEL | chr16 | 28932448 | chr16 | 28932578 | CD19 | EXON:2 | . | RABEP2 | GENE | . | . | MinSomaticScore | -130 | no | . | 1417,0 | 4030,15 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:25067:25067:6:0:0 | DELETION | DEL | chr16 | 30604627 | chr16 | 30605215 | ZNF689 | EXON:3 | . | ENSG00000289491 | INTERGENIC | . | . | PASS | -588 | no | . | 1286,25 | 1444,7 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:26753:26753:1:5:0 | DELETION | DEL | chr16 | 86510516 | chr16 | 86511389 | FOXF1 | EXON:1 | . | FENDRR | INTERGENIC | . | . | MinSomaticScore | -873 | no | . | 832,4 | 895,10 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:27023:27023:9:8:0 | DELETION | DEL | chr16 | 89933912 | chr16 | 89934199 | TUBB3 | INTRON:3 | . | ENSG00000198211 | INTRON:4 | . | . | PASS | -287 | no | . | 1722,2 | 3585,176 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:19565:19565:0:0:0 | DELETION | DEL | chr17 | 35099838 | chr17 | 35100662 | Vault | INTERGENIC | . | RAD51D | INTERGENIC | . | . | MinSomaticScore | -824 | no | . | 3084,16 | 3969,12 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:22482:22482:29:1:0 | DELETION | DEL | chr17 | 76736259 | chr17 | 76736373 | SRSF2 | EXON:2 | . | MFSD11 | INTERGENIC | . | . | PASS | -114 | no | . | 1230,0 | 3612,17 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:22482:22482:9:1:0 | DELETION | DEL | chr17 | 76736752 | chr17 | 76737447 | SRSF2 | EXON:1 | . | MFSD11&SRSF2 | GENE | . | . | MinSomaticScore | -695 | no | . | 1957,21 | 2076,22 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:33728:33728:17:4:0 | DELETION | DEL | chr19 | 8937551 | chr19 | 8938379 | MUC16 | EXON:5 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -828 | no | . | 2306,20 | 3502,20 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:35629:35629:2:1:0 | DELETION | DEL | chr19 | 35720597 | chr19 | 35721242 | KMT2B | EXON:3 | . | ZBTB32 | INTERGENIC | . | . | PASS | -645 | no | . | 2778,35 | 3683,14 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:40087:40087:33:5:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890573 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -284 | no | . | 868,6 | 576,32 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:40087:40087:32:2:0 | DELETION | DEL | chr22 | 22890289 | chr22 | 22890575 | IGLJ1 | INTERGENIC | . | IGLC1 | INTERGENIC | . | . | MinSomaticScore | -286 | no | . | 868,9 | 577,91 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:40084:40084:18:0:0 | DELETION | DEL | chr22 | 22894175 | chr22 | 22894662 | IGLC1 | INTERGENIC | . | IGLJ2 | INTERGENIC | . | . | MinSomaticScore | -487 | no | . | 2339,87 | 2858,53 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:208:208:4:5:0 | DELETION | DEL | chrX | 7844209 | chrX | 7844337 | VCX | INTERGENIC | . | VCX-ENSG00000274923 | INTERGENIC | . | . | MinSomaticScore | -128 | no | . | 77,0 | 258,9 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:1951:1951:5:3:0 | DELETION | DEL | chrX | 71603918 | chrX | 71604188 | GCNA | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | PASS | -270 | no | . | 2004,0 | 2640,34 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaDEL:0:2827:2827:20:0:0 | DELETION | DEL | chrX | 123912904 | chrX | 123913039 | XIAP | EXON:7 | . | INTERGENIC | INTERGENIC | . | . | MinSomaticScore | -135 | no | . | 98,0 | 526,31 | |
| 1136_5BE-T1-TDNA-1_A23WGJTLT4_2 | MantaBND:0:50015:50016:2:0:0:0 | TRANSLOCATION | BND | chr6_GL000251v2_alt | 3939027 | chr6 | 32584107 | INTERGENIC | INTERGENIC | - | HLA-DRB1 | GENE | - | . | PASS | 0 | yes | . | 1208,49 | . | MantaBND:0:50015:50016:2:0:0:1 |
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